Cluster: HRGMv2_0829_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0829
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0829_7 | HRGMv2_0829_7_94 | 87410 | 88399 | + | 3.A.1.1.10 |
| TC | HRGMv2_0829_7 | HRGMv2_0829_7_95 | 88409 | 89305 | + | 3.A.1.1.29 |
| TC | HRGMv2_0829_7 | HRGMv2_0829_7_96 | 89331 | 90935 | + | 3.A.1.1.10 |
| CAZyme | HRGMv2_0829_7 | HRGMv2_0829_7_97 | 91007 | 92473 | + | GH32 |
Gene ID: HRGMv2_0829_7_94
Type: TC
Location: 87410 - 88399 (+)
Type: TC
Location: 87410 - 88399 (+)
Gene ID: HRGMv2_0829_7_95
Type: TC
Location: 88409 - 89305 (+)
Type: TC
Location: 88409 - 89305 (+)
Gene ID: HRGMv2_0829_7_96
Type: TC
Location: 89331 - 90935 (+)
Type: TC
Location: 89331 - 90935 (+)
Gene ID: HRGMv2_0829_7_97
Type: CAZyme
Location: 91007 - 92473 (+)
Type: CAZyme
Location: 91007 - 92473 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp000435835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0829_7_96 | vegan > omnivore | 1.04863 | 0.00224 |
| HRGMv2_0829_7_97 | vegan > omnivore | 3.24245 | 0.00224 |