dbCAN Logo

Cluster: HRGMv2_0829_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0829_6 HRGMv2_0829_6_105 108127 109464 + GH13_20
STP HRGMv2_0829_6 HRGMv2_0829_6_106 109602 111947 + HATPase_c | HisKA
TC HRGMv2_0829_6 HRGMv2_0829_6_107 112204 113568 + 3.A.1.1.45
TC HRGMv2_0829_6 HRGMv2_0829_6_108 113893 114735 + 3.A.1.1.45
TC HRGMv2_0829_6 HRGMv2_0829_6_109 114735 115565 + 3.A.1.1.45
NULL(UNKNOWN) HRGMv2_0829_6 HRGMv2_0829_6_110 115643 116299 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0829_6 HRGMv2_0829_6_111 116428 116613 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0829_6 HRGMv2_0829_6_112 116762 118168 + 2.A.3.7.2
pfam HRGMv2_0829_6 HRGMv2_0829_6_113 118326 119261 + DUF5692
NULL(UNKNOWN) HRGMv2_0829_6 HRGMv2_0829_6_114 119198 119512 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0829_6 HRGMv2_0829_6_115 119676 120509 + 3.A.1.132.3
TC HRGMv2_0829_6 HRGMv2_0829_6_116 120699 121847 - 3.A.18.1.1
Gene ID: HRGMv2_0829_6_105
Type: CAZyme
Location: 108127 - 109464 (+)
Gene ID: HRGMv2_0829_6_106
Type: STP
Location: 109602 - 111947 (+)
Gene ID: HRGMv2_0829_6_107
Type: TC
Location: 112204 - 113568 (+)
Gene ID: HRGMv2_0829_6_108
Type: TC
Location: 113893 - 114735 (+)
Gene ID: HRGMv2_0829_6_109
Type: TC
Location: 114735 - 115565 (+)
Gene ID: HRGMv2_0829_6_110
Type:
Location: 115643 - 116299 (-)
Gene ID: HRGMv2_0829_6_111
Type:
Location: 116428 - 116613 (+)
Gene ID: HRGMv2_0829_6_112
Type: TC
Location: 116762 - 118168 (+)
Gene ID: HRGMv2_0829_6_113
Type: pfam
Location: 118326 - 119261 (+)
Gene ID: HRGMv2_0829_6_114
Type:
Location: 119198 - 119512 (-)
Gene ID: HRGMv2_0829_6_115
Type: TC
Location: 119676 - 120509 (+)
Gene ID: HRGMv2_0829_6_116
Type: TC
Location: 120699 - 121847 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0829_6_110 vegan > omnivore 3.30191 0.00224

🧭 Explore Read Mapping of CGC

← Back to Cluster List