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Cluster: HRGMv2_0829_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0829_5 HRGMv2_0829_5_117 125348 126094 + GT26
pfam HRGMv2_0829_5 HRGMv2_0829_5_118 126084 127616 + MurJ | Polysacc_synt_3
NULL(UNKNOWN) HRGMv2_0829_5 HRGMv2_0829_5_119 127620 128894 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0829_5 HRGMv2_0829_5_120 128901 130043 + GT4
pfam HRGMv2_0829_5 HRGMv2_0829_5_121 130055 130693 + FTCD_C
CAZyme HRGMv2_0829_5 HRGMv2_0829_5_122 130732 131535 - CE4
TC HRGMv2_0829_5 HRGMv2_0829_5_123 131955 133691 + 3.A.1.106.3
TC HRGMv2_0829_5 HRGMv2_0829_5_124 133691 135475 + 3.A.1.106.3
Gene ID: HRGMv2_0829_5_117
Type: CAZyme
Location: 125348 - 126094 (+)
Gene ID: HRGMv2_0829_5_118
Type: pfam
Location: 126084 - 127616 (+)
Gene ID: HRGMv2_0829_5_119
Type:
Location: 127620 - 128894 (+)
Gene ID: HRGMv2_0829_5_120
Type: CAZyme
Location: 128901 - 130043 (+)
Gene ID: HRGMv2_0829_5_121
Type: pfam
Location: 130055 - 130693 (+)
Gene ID: HRGMv2_0829_5_122
Type: CAZyme
Location: 130732 - 131535 (-)
Gene ID: HRGMv2_0829_5_123
Type: TC
Location: 131955 - 133691 (+)
Gene ID: HRGMv2_0829_5_124
Type: TC
Location: 133691 - 135475 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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