Cluster: HRGMv2_0829_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0829
- CGC Family ID: CGCFAM_00015
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0829_4 | HRGMv2_0829_4_161 | 176188 | 177726 | - | 2.A.66.1.40 |
| pfam | HRGMv2_0829_4 | HRGMv2_0829_4_162 | 177716 | 178969 | - | Wzy_C |
| CAZyme | HRGMv2_0829_4 | HRGMv2_0829_4_163 | 178997 | 179914 | - | GT2 |
| CAZyme | HRGMv2_0829_4 | HRGMv2_0829_4_164 | 179952 | 181052 | - | GT4 |
| CAZyme | HRGMv2_0829_4 | HRGMv2_0829_4_165 | 181074 | 182144 | - | GT4 |
Gene ID: HRGMv2_0829_4_161
Type: TC
Location: 176188 - 177726 (-)
Type: TC
Location: 176188 - 177726 (-)
Gene ID: HRGMv2_0829_4_162
Type: pfam
Location: 177716 - 178969 (-)
Type: pfam
Location: 177716 - 178969 (-)
Gene ID: HRGMv2_0829_4_163
Type: CAZyme
Location: 178997 - 179914 (-)
Type: CAZyme
Location: 178997 - 179914 (-)
Gene ID: HRGMv2_0829_4_164
Type: CAZyme
Location: 179952 - 181052 (-)
Type: CAZyme
Location: 179952 - 181052 (-)
Gene ID: HRGMv2_0829_4_165
Type: CAZyme
Location: 181074 - 182144 (-)
Type: CAZyme
Location: 181074 - 182144 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp000435835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.