Cluster: HRGMv2_0825_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0825
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0825_1 | HRGMv2_0825_1_544 | 559075 | 559791 | - | 3.A.1.128.3 |
| STP | HRGMv2_0825_1 | HRGMv2_0825_1_545 | 559989 | 561158 | + | Aminotran_1_2 |
| CAZyme | HRGMv2_0825_1 | HRGMv2_0825_1_546 | 561252 | 565940 | - | CBM9 |
| pfam | HRGMv2_0825_1 | HRGMv2_0825_1_547 | 566116 | 566946 | + | TPR_19 |
| TC | HRGMv2_0825_1 | HRGMv2_0825_1_548 | 567023 | 567991 | - | 8.A.21.2.2 |
| pfam | HRGMv2_0825_1 | HRGMv2_0825_1_549 | 567996 | 568427 | - | NfeD |
| pfam | HRGMv2_0825_1 | HRGMv2_0825_1_550 | 568785 | 570689 | + | CN_hydrolase | NAD_synthase |
| TC | HRGMv2_0825_1 | HRGMv2_0825_1_551 | 570855 | 572426 | + | 3.A.18.1.1 |
| TC | HRGMv2_0825_1 | HRGMv2_0825_1_552 | 572658 | 572921 | - | 1.E.29.1.2 |
| pfam | HRGMv2_0825_1 | HRGMv2_0825_1_553 | 572978 | 573520 | - | Acetyltransf_1 | Acetyltransf_10 |
| STP | HRGMv2_0825_1 | HRGMv2_0825_1_554 | 573563 | 574198 | - | TetR_N |
| TC | HRGMv2_0825_1 | HRGMv2_0825_1_555 | 574585 | 575949 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_0825_1_544
Type: TC
Location: 559075 - 559791 (-)
Type: TC
Location: 559075 - 559791 (-)
Gene ID: HRGMv2_0825_1_545
Type: STP
Location: 559989 - 561158 (+)
Type: STP
Location: 559989 - 561158 (+)
Gene ID: HRGMv2_0825_1_546
Type: CAZyme
Location: 561252 - 565940 (-)
Type: CAZyme
Location: 561252 - 565940 (-)
Gene ID: HRGMv2_0825_1_547
Type: pfam
Location: 566116 - 566946 (+)
Type: pfam
Location: 566116 - 566946 (+)
Gene ID: HRGMv2_0825_1_548
Type: TC
Location: 567023 - 567991 (-)
Type: TC
Location: 567023 - 567991 (-)
Gene ID: HRGMv2_0825_1_549
Type: pfam
Location: 567996 - 568427 (-)
Type: pfam
Location: 567996 - 568427 (-)
Gene ID: HRGMv2_0825_1_550
Type: pfam
Location: 568785 - 570689 (+)
Type: pfam
Location: 568785 - 570689 (+)
Gene ID: HRGMv2_0825_1_551
Type: TC
Location: 570855 - 572426 (+)
Type: TC
Location: 570855 - 572426 (+)
Gene ID: HRGMv2_0825_1_552
Type: TC
Location: 572658 - 572921 (-)
Type: TC
Location: 572658 - 572921 (-)
Gene ID: HRGMv2_0825_1_553
Type: pfam
Location: 572978 - 573520 (-)
Type: pfam
Location: 572978 - 573520 (-)
Gene ID: HRGMv2_0825_1_554
Type: STP
Location: 573563 - 574198 (-)
Type: STP
Location: 573563 - 574198 (-)
Gene ID: HRGMv2_0825_1_555
Type: TC
Location: 574585 - 575949 (-)
Type: TC
Location: 574585 - 575949 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900539375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.