Cluster: HRGMv2_0825_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0825
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0825_1 | HRGMv2_0825_1_252 | 238998 | 239822 | - | 3.A.1.23.2 |
| TC | HRGMv2_0825_1 | HRGMv2_0825_1_253 | 239836 | 240630 | - | 3.A.1.23.6 |
| NULL(UNKNOWN) | HRGMv2_0825_1 | HRGMv2_0825_1_254 | 240848 | 241525 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0825_1 | HRGMv2_0825_1_255 | 241569 | 242519 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0825_1 | HRGMv2_0825_1_256 | 242557 | 245103 | + | GT51 |
Gene ID: HRGMv2_0825_1_252
Type: TC
Location: 238998 - 239822 (-)
Type: TC
Location: 238998 - 239822 (-)
Gene ID: HRGMv2_0825_1_253
Type: TC
Location: 239836 - 240630 (-)
Type: TC
Location: 239836 - 240630 (-)
Gene ID: HRGMv2_0825_1_254
Type:
Location: 240848 - 241525 (+)
Type:
Location: 240848 - 241525 (+)
Gene ID: HRGMv2_0825_1_255
Type:
Location: 241569 - 242519 (+)
Type:
Location: 241569 - 242519 (+)
Gene ID: HRGMv2_0825_1_256
Type: CAZyme
Location: 242557 - 245103 (+)
Type: CAZyme
Location: 242557 - 245103 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900539375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.