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Cluster: HRGMv2_0825_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0825_11 HRGMv2_0825_11_42 42136 42849 + 8.A.3.2.3
TC HRGMv2_0825_11 HRGMv2_0825_11_43 42842 43486 + 8.A.3.1.2
TC HRGMv2_0825_11 HRGMv2_0825_11_44 43516 44178 + 9.B.18.1.2
pfam HRGMv2_0825_11 HRGMv2_0825_11_45 44283 45593 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_0825_11 HRGMv2_0825_11_46 45813 50411 + GH31_10
CAZyme HRGMv2_0825_11 HRGMv2_0825_11_47 50631 51722 + GT4
pfam HRGMv2_0825_11 HRGMv2_0825_11_48 51750 52235 + Hexapep | Hexapep_2
CAZyme HRGMv2_0825_11 HRGMv2_0825_11_49 52232 53332 + GT4
NULL(UNKNOWN) HRGMv2_0825_11 HRGMv2_0825_11_50 53372 54490 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0825_11 HRGMv2_0825_11_51 54454 55608 + GT2
CAZyme HRGMv2_0825_11 HRGMv2_0825_11_52 55619 56701 + GT4
CAZyme HRGMv2_0825_11 HRGMv2_0825_11_53 56716 57774 + GT2
CAZyme HRGMv2_0825_11 HRGMv2_0825_11_54 57791 59032 + GT4
CAZyme HRGMv2_0825_11 HRGMv2_0825_11_55 59025 59969 + GT2
pfam HRGMv2_0825_11 HRGMv2_0825_11_56 60007 61548 + Polysacc_synt
CAZyme HRGMv2_0825_11 HRGMv2_0825_11_57 61560 62477 + GT11
TC HRGMv2_0825_11 HRGMv2_0825_11_58 62739 63512 + 8.A.3.2.3
CAZyme HRGMv2_0825_11 HRGMv2_0825_11_59 63573 64760 + GT4
CAZyme HRGMv2_0825_11 HRGMv2_0825_11_60 64826 66049 + GT4
pfam HRGMv2_0825_11 HRGMv2_0825_11_61 66081 67187 + PS_pyruv_trans
STP HRGMv2_0825_11 HRGMv2_0825_11_62 67212 68453 + Fer4
CAZyme HRGMv2_0825_11 HRGMv2_0825_11_63 68772 69788 + GT2
pfam HRGMv2_0825_11 HRGMv2_0825_11_64 69965 71116 + EpsG
CAZyme HRGMv2_0825_11 HRGMv2_0825_11_65 71196 72155 + GT2
pfam HRGMv2_0825_11 HRGMv2_0825_11_66 72159 73235 + PS_pyruv_trans
TC HRGMv2_0825_11 HRGMv2_0825_11_67 73225 74781 + 2.A.66.1.40
Gene ID: HRGMv2_0825_11_42
Type: TC
Location: 42136 - 42849 (+)
Gene ID: HRGMv2_0825_11_43
Type: TC
Location: 42842 - 43486 (+)
Gene ID: HRGMv2_0825_11_44
Type: TC
Location: 43516 - 44178 (+)
Gene ID: HRGMv2_0825_11_45
Type: pfam
Location: 44283 - 45593 (+)
Gene ID: HRGMv2_0825_11_46
Type: CAZyme
Location: 45813 - 50411 (+)
Gene ID: HRGMv2_0825_11_47
Type: CAZyme
Location: 50631 - 51722 (+)
Gene ID: HRGMv2_0825_11_48
Type: pfam
Location: 51750 - 52235 (+)
Gene ID: HRGMv2_0825_11_49
Type: CAZyme
Location: 52232 - 53332 (+)
Gene ID: HRGMv2_0825_11_50
Type:
Location: 53372 - 54490 (+)
Gene ID: HRGMv2_0825_11_51
Type: CAZyme
Location: 54454 - 55608 (+)
Gene ID: HRGMv2_0825_11_52
Type: CAZyme
Location: 55619 - 56701 (+)
Gene ID: HRGMv2_0825_11_53
Type: CAZyme
Location: 56716 - 57774 (+)
Gene ID: HRGMv2_0825_11_54
Type: CAZyme
Location: 57791 - 59032 (+)
Gene ID: HRGMv2_0825_11_55
Type: CAZyme
Location: 59025 - 59969 (+)
Gene ID: HRGMv2_0825_11_56
Type: pfam
Location: 60007 - 61548 (+)
Gene ID: HRGMv2_0825_11_57
Type: CAZyme
Location: 61560 - 62477 (+)
Gene ID: HRGMv2_0825_11_58
Type: TC
Location: 62739 - 63512 (+)
Gene ID: HRGMv2_0825_11_59
Type: CAZyme
Location: 63573 - 64760 (+)
Gene ID: HRGMv2_0825_11_60
Type: CAZyme
Location: 64826 - 66049 (+)
Gene ID: HRGMv2_0825_11_61
Type: pfam
Location: 66081 - 67187 (+)
Gene ID: HRGMv2_0825_11_62
Type: STP
Location: 67212 - 68453 (+)
Gene ID: HRGMv2_0825_11_63
Type: CAZyme
Location: 68772 - 69788 (+)
Gene ID: HRGMv2_0825_11_64
Type: pfam
Location: 69965 - 71116 (+)
Gene ID: HRGMv2_0825_11_65
Type: CAZyme
Location: 71196 - 72155 (+)
Gene ID: HRGMv2_0825_11_66
Type: pfam
Location: 72159 - 73235 (+)
Gene ID: HRGMv2_0825_11_67
Type: TC
Location: 73225 - 74781 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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