Cluster: HRGMv2_0825_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0825
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0825_9 | HRGMv2_0825_9_23 | 27640 | 29370 | + | 3.A.1.135.7 |
| TC | HRGMv2_0825_9 | HRGMv2_0825_9_24 | 29370 | 31112 | + | 3.A.1.135.5 |
| pfam | HRGMv2_0825_9 | HRGMv2_0825_9_25 | 31166 | 32185 | - | A_deaminase | Amidohydro_1 |
| CAZyme | HRGMv2_0825_9 | HRGMv2_0825_9_26 | 32295 | 35192 | - | CBM26 | GH13_28 |
| pfam | HRGMv2_0825_9 | HRGMv2_0825_9_27 | 35280 | 36500 | - | PucR | HTH_30 | GGDEF_2 |
| TC | HRGMv2_0825_9 | HRGMv2_0825_9_28 | 36519 | 37697 | - | 2.A.86.1.11 |
Gene ID: HRGMv2_0825_9_23
Type: TC
Location: 27640 - 29370 (+)
Type: TC
Location: 27640 - 29370 (+)
Gene ID: HRGMv2_0825_9_24
Type: TC
Location: 29370 - 31112 (+)
Type: TC
Location: 29370 - 31112 (+)
Gene ID: HRGMv2_0825_9_25
Type: pfam
Location: 31166 - 32185 (-)
Type: pfam
Location: 31166 - 32185 (-)
Gene ID: HRGMv2_0825_9_26
Type: CAZyme
Location: 32295 - 35192 (-)
Type: CAZyme
Location: 32295 - 35192 (-)
Gene ID: HRGMv2_0825_9_27
Type: pfam
Location: 35280 - 36500 (-)
Type: pfam
Location: 35280 - 36500 (-)
Gene ID: HRGMv2_0825_9_28
Type: TC
Location: 36519 - 37697 (-)
Type: TC
Location: 36519 - 37697 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900539375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.