Cluster: HRGMv2_0825_CGC25
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0825
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0825_5 | HRGMv2_0825_5_110 | 118993 | 119790 | + | 3.A.1.17.4 |
| TC | HRGMv2_0825_5 | HRGMv2_0825_5_111 | 119808 | 120641 | + | 3.A.1.16.2 |
| pfam | HRGMv2_0825_5 | HRGMv2_0825_5_112 | 120684 | 121850 | + | Fe-ADH | Fe-ADH_2 | ADH_Fe_C |
| pfam | HRGMv2_0825_5 | HRGMv2_0825_5_113 | 122028 | 123188 | + | Lactamase_B | Flavodoxin_5 | ODP |
| CAZyme | HRGMv2_0825_5 | HRGMv2_0825_5_114 | 123426 | 125630 | + | GH13_42 |
| CAZyme | HRGMv2_0825_5 | HRGMv2_0825_5_115 | 125866 | 128094 | + | GH13_42 |
Gene ID: HRGMv2_0825_5_110
Type: TC
Location: 118993 - 119790 (+)
Type: TC
Location: 118993 - 119790 (+)
Gene ID: HRGMv2_0825_5_111
Type: TC
Location: 119808 - 120641 (+)
Type: TC
Location: 119808 - 120641 (+)
Gene ID: HRGMv2_0825_5_112
Type: pfam
Location: 120684 - 121850 (+)
Type: pfam
Location: 120684 - 121850 (+)
Gene ID: HRGMv2_0825_5_113
Type: pfam
Location: 122028 - 123188 (+)
Type: pfam
Location: 122028 - 123188 (+)
Gene ID: HRGMv2_0825_5_114
Type: CAZyme
Location: 123426 - 125630 (+)
Type: CAZyme
Location: 123426 - 125630 (+)
Gene ID: HRGMv2_0825_5_115
Type: CAZyme
Location: 125866 - 128094 (+)
Type: CAZyme
Location: 125866 - 128094 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900539375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.