Cluster: HRGMv2_0825_CGC24
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0825
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0825_5 | HRGMv2_0825_5_53 | 58977 | 59813 | + | 3.A.1.1.11 |
| TC | HRGMv2_0825_5 | HRGMv2_0825_5_54 | 59822 | 60661 | + | 3.A.1.1.34 |
| pfam | HRGMv2_0825_5 | HRGMv2_0825_5_55 | 60669 | 61952 | + | Biotin_lipoyl_2 |
| NULL(UNKNOWN) | HRGMv2_0825_5 | HRGMv2_0825_5_56 | 61949 | 62962 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0825_5 | HRGMv2_0825_5_57 | 63096 | 63749 | - | 9.B.105.2.2 |
| CAZyme | HRGMv2_0825_5 | HRGMv2_0825_5_58 | 63801 | 65018 | - | GT2 |
Gene ID: HRGMv2_0825_5_53
Type: TC
Location: 58977 - 59813 (+)
Type: TC
Location: 58977 - 59813 (+)
Gene ID: HRGMv2_0825_5_54
Type: TC
Location: 59822 - 60661 (+)
Type: TC
Location: 59822 - 60661 (+)
Gene ID: HRGMv2_0825_5_55
Type: pfam
Location: 60669 - 61952 (+)
Type: pfam
Location: 60669 - 61952 (+)
Gene ID: HRGMv2_0825_5_56
Type:
Location: 61949 - 62962 (+)
Type:
Location: 61949 - 62962 (+)
Gene ID: HRGMv2_0825_5_57
Type: TC
Location: 63096 - 63749 (-)
Type: TC
Location: 63096 - 63749 (-)
Gene ID: HRGMv2_0825_5_58
Type: CAZyme
Location: 63801 - 65018 (-)
Type: CAZyme
Location: 63801 - 65018 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900539375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.