Cluster: HRGMv2_0825_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0825
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0825_1 | HRGMv2_0825_1_125 | 108985 | 109935 | + | 3.A.11.1.4 |
| pfam | HRGMv2_0825_1 | HRGMv2_0825_1_126 | 109962 | 111026 | + | Radical_SAM |
| pfam | HRGMv2_0825_1 | HRGMv2_0825_1_127 | 111019 | 112212 | + | MMR_HSR1 | FeoB_N | HydF_dimer | HydF_tetramer |
| CAZyme | HRGMv2_0825_1 | HRGMv2_0825_1_128 | 112329 | 113945 | + | GH13_20 |
| CAZyme | HRGMv2_0825_1 | HRGMv2_0825_1_129 | 114189 | 117461 | + | CBM41 | GH13_14 |
Gene ID: HRGMv2_0825_1_125
Type: TC
Location: 108985 - 109935 (+)
Type: TC
Location: 108985 - 109935 (+)
Gene ID: HRGMv2_0825_1_126
Type: pfam
Location: 109962 - 111026 (+)
Type: pfam
Location: 109962 - 111026 (+)
Gene ID: HRGMv2_0825_1_127
Type: pfam
Location: 111019 - 112212 (+)
Type: pfam
Location: 111019 - 112212 (+)
Gene ID: HRGMv2_0825_1_128
Type: CAZyme
Location: 112329 - 113945 (+)
Type: CAZyme
Location: 112329 - 113945 (+)
Gene ID: HRGMv2_0825_1_129
Type: CAZyme
Location: 114189 - 117461 (+)
Type: CAZyme
Location: 114189 - 117461 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900539375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.