Cluster: HRGMv2_0825_CGC16
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0825
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0825_3 | HRGMv2_0825_3_178 | 190613 | 192613 | + | GH13_14 |
| pfam | HRGMv2_0825_3 | HRGMv2_0825_3_179 | 192838 | 193602 | + | NERD |
| TC | HRGMv2_0825_3 | HRGMv2_0825_3_180 | 193852 | 194856 | + | 3.A.1.34.1 |
| TC | HRGMv2_0825_3 | HRGMv2_0825_3_181 | 194856 | 195794 | + | 3.A.1.34.1 |
| TC | HRGMv2_0825_3 | HRGMv2_0825_3_182 | 195796 | 196593 | + | 3.A.1.34.1 |
Gene ID: HRGMv2_0825_3_178
Type: CAZyme
Location: 190613 - 192613 (+)
Type: CAZyme
Location: 190613 - 192613 (+)
Gene ID: HRGMv2_0825_3_179
Type: pfam
Location: 192838 - 193602 (+)
Type: pfam
Location: 192838 - 193602 (+)
Gene ID: HRGMv2_0825_3_180
Type: TC
Location: 193852 - 194856 (+)
Type: TC
Location: 193852 - 194856 (+)
Gene ID: HRGMv2_0825_3_181
Type: TC
Location: 194856 - 195794 (+)
Type: TC
Location: 194856 - 195794 (+)
Gene ID: HRGMv2_0825_3_182
Type: TC
Location: 195796 - 196593 (+)
Type: TC
Location: 195796 - 196593 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900539375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.