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Cluster: HRGMv2_0825_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0825_2 HRGMv2_0825_2_288 347721 348641 - GT2 | GT2
CAZyme HRGMv2_0825_2 HRGMv2_0825_2_289 348651 350777 - GT2 | GT2
CAZyme HRGMv2_0825_2 HRGMv2_0825_2_290 350806 352932 - GT2
TC HRGMv2_0825_2 HRGMv2_0825_2_291 352961 354211 - 3.A.1.103.1
TC HRGMv2_0825_2 HRGMv2_0825_2_292 354224 355588 - 3.A.1.104.1
TC HRGMv2_0825_2 HRGMv2_0825_2_293 355604 357001 - 9.B.18.1.1
CAZyme HRGMv2_0825_2 HRGMv2_0825_2_294 357005 358027 - GT2
pfam HRGMv2_0825_2 HRGMv2_0825_2_295 358057 358623 - dTDP_sugar_isom
pfam HRGMv2_0825_2 HRGMv2_0825_2_296 358697 359710 - adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | KR | GDP_Man_Dehyd
CAZyme HRGMv2_0825_2 HRGMv2_0825_2_297 359908 363858 - CBM26 | GH13_28
CAZyme HRGMv2_0825_2 HRGMv2_0825_2_298 364095 367013 - CBM74
CAZyme HRGMv2_0825_2 HRGMv2_0825_2_299 367112 370897 - GH13_19
CAZyme HRGMv2_0825_2 HRGMv2_0825_2_300 371132 372100 - GT2
CAZyme HRGMv2_0825_2 HRGMv2_0825_2_301 372116 372859 - GT32
NULL(UNKNOWN) HRGMv2_0825_2 HRGMv2_0825_2_302 372895 374070 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0825_2 HRGMv2_0825_2_303 374098 374862 - CpsB_CapC
TC HRGMv2_0825_2 HRGMv2_0825_2_304 374869 375534 - 8.A.3.2.1
TC HRGMv2_0825_2 HRGMv2_0825_2_305 375549 376223 - 8.A.3.2.3
sulfatase HRGMv2_0825_2 HRGMv2_0825_2_306 376267 377871 - S1_97
peptidase HRGMv2_0825_2 HRGMv2_0825_2_307 378213 379511 - M18.UPW
TC HRGMv2_0825_2 HRGMv2_0825_2_308 379677 380858 + 2.A.4.7.7
TC HRGMv2_0825_2 HRGMv2_0825_2_309 380927 381649 - 3.A.1.3.25
TC HRGMv2_0825_2 HRGMv2_0825_2_310 381636 383120 - 3.A.1.3.20
NULL(UNKNOWN) HRGMv2_0825_2 HRGMv2_0825_2_311 383295 384377 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0825_2 HRGMv2_0825_2_312 384477 386570 - UvrD-helicase | AAA_19 | UvrD_C
TC HRGMv2_0825_2 HRGMv2_0825_2_313 386643 388658 - 3.A.25.2.1
Gene ID: HRGMv2_0825_2_288
Type: CAZyme
Location: 347721 - 348641 (-)
Gene ID: HRGMv2_0825_2_289
Type: CAZyme
Location: 348651 - 350777 (-)
Gene ID: HRGMv2_0825_2_290
Type: CAZyme
Location: 350806 - 352932 (-)
Gene ID: HRGMv2_0825_2_291
Type: TC
Location: 352961 - 354211 (-)
Gene ID: HRGMv2_0825_2_292
Type: TC
Location: 354224 - 355588 (-)
Gene ID: HRGMv2_0825_2_293
Type: TC
Location: 355604 - 357001 (-)
Gene ID: HRGMv2_0825_2_294
Type: CAZyme
Location: 357005 - 358027 (-)
Gene ID: HRGMv2_0825_2_295
Type: pfam
Location: 358057 - 358623 (-)
Gene ID: HRGMv2_0825_2_296
Type: pfam
Location: 358697 - 359710 (-)
Gene ID: HRGMv2_0825_2_297
Type: CAZyme
Location: 359908 - 363858 (-)
Gene ID: HRGMv2_0825_2_298
Type: CAZyme
Location: 364095 - 367013 (-)
Gene ID: HRGMv2_0825_2_299
Type: CAZyme
Location: 367112 - 370897 (-)
Gene ID: HRGMv2_0825_2_300
Type: CAZyme
Location: 371132 - 372100 (-)
Gene ID: HRGMv2_0825_2_301
Type: CAZyme
Location: 372116 - 372859 (-)
Gene ID: HRGMv2_0825_2_302
Type:
Location: 372895 - 374070 (-)
Gene ID: HRGMv2_0825_2_303
Type: pfam
Location: 374098 - 374862 (-)
Gene ID: HRGMv2_0825_2_304
Type: TC
Location: 374869 - 375534 (-)
Gene ID: HRGMv2_0825_2_305
Type: TC
Location: 375549 - 376223 (-)
Gene ID: HRGMv2_0825_2_306
Type: sulfatase
Location: 376267 - 377871 (-)
Gene ID: HRGMv2_0825_2_307
Type: peptidase
Location: 378213 - 379511 (-)
Gene ID: HRGMv2_0825_2_308
Type: TC
Location: 379677 - 380858 (+)
Gene ID: HRGMv2_0825_2_309
Type: TC
Location: 380927 - 381649 (-)
Gene ID: HRGMv2_0825_2_310
Type: TC
Location: 381636 - 383120 (-)
Gene ID: HRGMv2_0825_2_311
Type:
Location: 383295 - 384377 (+)
Gene ID: HRGMv2_0825_2_312
Type: pfam
Location: 384477 - 386570 (-)
Gene ID: HRGMv2_0825_2_313
Type: TC
Location: 386643 - 388658 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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