Cluster: HRGMv2_0823_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0823
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0823_13 | HRGMv2_0823_13_18 | 15341 | 16687 | + | 2.A.66.1.32 |
| TF | HRGMv2_0823_13 | HRGMv2_0823_13_19 | 16772 | 17713 | - | HTH_AraC |
| TC | HRGMv2_0823_13 | HRGMv2_0823_13_20 | 17710 | 19455 | - | 9.B.33.1.1 |
| STP | HRGMv2_0823_13 | HRGMv2_0823_13_21 | 19522 | 21045 | - | SBP_bac_1 |
| TC | HRGMv2_0823_13 | HRGMv2_0823_13_22 | 21118 | 22029 | - | 3.A.1.1.29 |
| TC | HRGMv2_0823_13 | HRGMv2_0823_13_23 | 22026 | 22970 | - | 3.A.1.1.10 |
| CAZyme | HRGMv2_0823_13 | HRGMv2_0823_13_24 | 23225 | 25186 | + | GH36 |
| NULL(UNKNOWN) | HRGMv2_0823_13 | HRGMv2_0823_13_25 | 25316 | 26545 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0823_13 | HRGMv2_0823_13_26 | 26718 | 27464 | - | 3.A.1.3.25 |
| TC | HRGMv2_0823_13 | HRGMv2_0823_13_27 | 27454 | 28182 | - | 3.A.1.3.20 |
| TC | HRGMv2_0823_13 | HRGMv2_0823_13_28 | 28258 | 29013 | - | 3.A.1.3.27 |
| TC | HRGMv2_0823_13 | HRGMv2_0823_13_29 | 29169 | 29993 | - | 1.A.35.1.2 |
Gene ID: HRGMv2_0823_13_18
Type: TC
Location: 15341 - 16687 (+)
Type: TC
Location: 15341 - 16687 (+)
Gene ID: HRGMv2_0823_13_19
Type: TF
Location: 16772 - 17713 (-)
Type: TF
Location: 16772 - 17713 (-)
Gene ID: HRGMv2_0823_13_20
Type: TC
Location: 17710 - 19455 (-)
Type: TC
Location: 17710 - 19455 (-)
Gene ID: HRGMv2_0823_13_21
Type: STP
Location: 19522 - 21045 (-)
Type: STP
Location: 19522 - 21045 (-)
Gene ID: HRGMv2_0823_13_22
Type: TC
Location: 21118 - 22029 (-)
Type: TC
Location: 21118 - 22029 (-)
Gene ID: HRGMv2_0823_13_23
Type: TC
Location: 22026 - 22970 (-)
Type: TC
Location: 22026 - 22970 (-)
Gene ID: HRGMv2_0823_13_24
Type: CAZyme
Location: 23225 - 25186 (+)
Type: CAZyme
Location: 23225 - 25186 (+)
Gene ID: HRGMv2_0823_13_25
Type:
Location: 25316 - 26545 (+)
Type:
Location: 25316 - 26545 (+)
Gene ID: HRGMv2_0823_13_26
Type: TC
Location: 26718 - 27464 (-)
Type: TC
Location: 26718 - 27464 (-)
Gene ID: HRGMv2_0823_13_27
Type: TC
Location: 27454 - 28182 (-)
Type: TC
Location: 27454 - 28182 (-)
Gene ID: HRGMv2_0823_13_28
Type: TC
Location: 28258 - 29013 (-)
Type: TC
Location: 28258 - 29013 (-)
Gene ID: HRGMv2_0823_13_29
Type: TC
Location: 29169 - 29993 (-)
Type: TC
Location: 29169 - 29993 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Faecivicinus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.