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PROTEIN: HRGMv2_0823_13_25

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_0823_13_25.pdb
Genome ID:
HRGMv2_0823
Protein ID:
HRGMv2_0823_13_25

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKMPLLSRKH   FPKIAPAWKS   FLLLYGFFTI   ISTFSSTFIN   TFLLKATGDN   NQVSSFYIVL 60
GAVQPFAMLV   AVYIIRLRSA   LFSQALGFAL   YAAGFLALSI   LQQRAAANVL   WIGAIFSAAN 120
GFFFTTYALQ   LLEYVTDDTR   DSSYGLQNAL   GGLIGILLPS   VTGFLLARFS   DFTGYTIIFM 180
LGLIVSIASI   VVVFRLEPLT   NFAQRPQLGR   ALHTLIFHRA   ARAAMLASAA   NGFYSGTMTF 240
YLNMLMYAIV   SSEAVIGVAQ   TLASIAAILS   SLVYSRIVRP   ENRKKAILLS   LTATIVAAIT 300
LSAAFQLIPL   IAFNTLLSVT   SVFFLTPVMT   AYVGAIERIR   PLAGLGSEVH   ALREFWYGTG 360
RVLGILTTML   LSDLRNGAII   AIVIILGVQM   LPALLMDAMQ   ENASEEPNA 409
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0K0E9K2-F1-model_v4 12 405 2 395 0.8237 0.8674
AF-Q0PB52-F1-model_v4 9 404 1 395 0.8196 0.8549
AF-A0A0H3GS85-F1-model_v4 13 408 6 398 0.8178 0.861
AF-A0A0N4U5Y8-F1-model_v4 11 405 2 396 0.8177 0.8608
AF-Q9I4C6-F1-model_v4 6 407 4 409 0.8177 0.8526
AF-P39352-F1-model_v4 6 409 1 405 0.817 0.8455
AF-A0A044QLY0-F1-model_v4 12 404 5 398 0.8147 0.8645
AF-Q9HY47-F1-model_v4 15 404 1 392 0.814 0.856
AF-Q8ZQD2-F1-model_v4 11 404 1 379 0.8107 0.8662
AF-A0A133CGB6-F1-model_v4 14 404 2 398 0.8089 0.8542
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q6NMN6-F1-model_v4 GT5 15 405 24 470 0.7365 0.8536
A0A9W8R2E6 GH88 12 408 46 510 0.7019 0.8205
AF-A2S189-F1-model_v4 GH3 15 407 15 417 0.6794 0.7409
A0A918L8E6 GT2 11 409 1 483 0.6453 0.8303
A0A3C1RID2 GH17 11 409 9 764 0.6349 0.8609
AF-A0A024FEX3-F1-model_v4 GH17 10 407 8 466 0.6334 0.8593
AF-A0A1Y0M8J3-F1-model_v4 GH17 10 406 7 464 0.6314 0.8576
AF-A0A4P6YE09-F1-model_v4 GH17 14 406 1 453 0.6309 0.8613
AF-W8VNY0-F1-model_v4 GH17 12 406 7 462 0.6302 0.8594
AF-A0A160T6G0-F1-model_v4 CBM9 15 408 14 541 0.6301 0.7654
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A9W8R2E6 GH88 12 408 46 510 0.7019 0.8205
A2S189 GH3 15 407 15 417 0.6794 0.7409
A0A918L8E6 GT2 11 409 1 483 0.6453 0.8303
A0A3C1RID2 GH17 11 409 9 764 0.6349 0.8609
A0A160T6G0 CBM9 15 408 14 541 0.6301 0.7654
A0A9Q8T2G0 CE1 1 409 299 879 0.6182 0.8512
BEI93633.1 AA6 13 408 58 545 0.6158 0.8314
A0A7H1AHD7 GH43_1 13 407 13 492 0.6083 0.8455
A0A7H8RF34 CBM24 8 409 119 771 0.6048 0.8134
VEC82708.1 GH88 9 409 1 435 0.5995 0.8221
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6t1z-assembly1.cif.gz_A 9 407 2 393 0.8107 0.8516
7ckr-assembly1.cif.gz_A 13 404 1 382 0.8089 0.8564
6lyy-assembly1.cif.gz_A 13 405 1 382 0.8047 0.8525
3o7q-assembly1.cif.gz_A 12 403 1 414 0.8031 0.8614
8ex5-assembly1.cif.gz_A 13 408 2 411 0.8022 0.8526
7l17-assembly1.cif.gz_A 12 406 1 445 0.8014 0.8877
3o7p-assembly1.cif.gz_A 13 403 2 410 0.7989 0.8549
8jt9-assembly1.cif.gz_A 16 404 1 384 0.7975 0.8454
6w4s-assembly1.cif.gz_F 13 401 4 421 0.7959 0.8652
6lz0-assembly1.cif.gz_A 13 405 1 375 0.794 0.8486
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P42112-F1-model_v4 18 406 1 391 0.8366 0.884
AF-C6DFD4-F1-model_v4 13 408 7 400 0.8327 0.8735
AF-Q6D469-F1-model_v4 13 407 7 399 0.8304 0.8732
AF-O34929-F1-model_v4 13 409 1 389 0.8296 0.8725
AF-P42306-F1-model_v4 9 409 1 427 0.8283 0.8817
AF-B7NL69-F1-model_v4 13 408 7 401 0.8256 0.8658
AF-B6I9E2-F1-model_v4 13 408 7 401 0.825 0.8647
AF-A1A9W0-F1-model_v4 13 408 7 401 0.8248 0.8649
AF-B7LFZ9-F1-model_v4 13 408 7 401 0.8243 0.8642
AF-Q3Z351-F1-model_v4 13 408 7 401 0.8242 0.8646
Download Full SwissProt Results