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Cluster: HRGMv2_0784_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0784_67 HRGMv2_0784_67_28 32491 33285 - 3.A.2.1.5
NULL(UNKNOWN) HRGMv2_0784_67 HRGMv2_0784_67_29 33530 34003 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0784_67 HRGMv2_0784_67_30 34317 34850 - Rubrerythrin
CAZyme HRGMv2_0784_67 HRGMv2_0784_67_31 35244 36212 + GH43_26
CAZyme HRGMv2_0784_67 HRGMv2_0784_67_32 36429 37226 + GT2
TC HRGMv2_0784_67 HRGMv2_0784_67_33 37223 38017 + 3.A.1.103.4
TC HRGMv2_0784_67 HRGMv2_0784_67_34 38073 38777 + 3.A.1.103.1
pfam HRGMv2_0784_67 HRGMv2_0784_67_35 39020 41242 - PS_pyruv_trans
CAZyme HRGMv2_0784_67 HRGMv2_0784_67_36 41243 44302 - GT2
NULL(UNKNOWN) HRGMv2_0784_67 HRGMv2_0784_67_37 44323 45630 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0784_67 HRGMv2_0784_67_38 45959 49003 - GH38
Gene ID: HRGMv2_0784_67_28
Type: TC
Location: 32491 - 33285 (-)
Gene ID: HRGMv2_0784_67_29
Type:
Location: 33530 - 34003 (+)
Gene ID: HRGMv2_0784_67_30
Type: pfam
Location: 34317 - 34850 (-)
Gene ID: HRGMv2_0784_67_31
Type: CAZyme
Location: 35244 - 36212 (+)
Gene ID: HRGMv2_0784_67_32
Type: CAZyme
Location: 36429 - 37226 (+)
Gene ID: HRGMv2_0784_67_33
Type: TC
Location: 37223 - 38017 (+)
Gene ID: HRGMv2_0784_67_34
Type: TC
Location: 38073 - 38777 (+)
Gene ID: HRGMv2_0784_67_35
Type: pfam
Location: 39020 - 41242 (-)
Gene ID: HRGMv2_0784_67_36
Type: CAZyme
Location: 41243 - 44302 (-)
Gene ID: HRGMv2_0784_67_37
Type:
Location: 44323 - 45630 (-)
Gene ID: HRGMv2_0784_67_38
Type: CAZyme
Location: 45959 - 49003 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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