PROTEIN: HRGMv2_0784_67_37
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Protein File & Metadata
Source:
HRGMv2_0784_67_37.pdb
Genome ID:
Protein ID:
HRGMv2_0784_67_37
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Protein Sequence
MAPSLADFVC LIGGNIPHTL YRGNVLEKEA QKTIGELNAP LLYSFSKFVL DTAQKRGLKK 60 VYFLARDGYE PYLFAKRLAR SYHYSVECRY LFSSRLAWRL AIYARLSEKE MSELIFSPSL 120 FLTPDMILER IRATPQEKAG LLVGTGFSGN DLLNACQCRY LQRKLEKDKR FWKIARRNSE 180 QALEITLKYF SQEGLLDDDF AICDTGWSGS MQKCLELILG TLGISHTVHG IYFGLYACPK 240 ELFPRVSAYY FLPDHKFFRK AKFNNNLLEA MFVSPHGMTV GYKEKNGKIL PVLKEEKAEW 300 FIEDHLYLQK KLEEYLKMGT DTDETEIQKR LIKVMYKPMR EALICFSRYR FSDDPSEQKR 360 DSIVRGLTEE EAKRFLVFNR LRAKLSKEKR KPLPNVYWLY GSIEASDLKH KYWYRWNCLF 420 WEMMRLVRIW CRSDR 435
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQU8-F1-model_v4 | 25 | 412 | 238 | 628 | 0.6262 |
0.8318 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0U5F758-F1-model_v4 | GT2 | 19 | 420 | 2 | 402 | 0.5816 |
0.7681 |
| V4JBH5 | GT2 | 23 | 424 | 1 | 398 | 0.5621 |
0.7918 |
| A0A9J7AXY3 | GT2 | 20 | 427 | 2 | 399 | 0.5576 |
0.7752 |
| AF-W0DNV7-F1-model_v4 | GT2 | 24 | 432 | 669 | 1091 | 0.5565 |
0.8456 |
| AF-A0A2I6S8V6-F1-model_v4 | GT2 | 25 | 430 | 650 | 1067 | 0.5549 |
0.8435 |
| AF-A0A0H3KC95-F1-model_v4 | GT2 | 18 | 424 | 3 | 405 | 0.5529 |
0.7794 |
| A0A1I7GMF6 | GT2 | 24 | 427 | 667 | 1083 | 0.5507 |
0.8446 |
| A0A974WXG9 | GT4 | 24 | 421 | 672 | 1078 | 0.5505 |
0.8602 |
| AF-W8KPG0-F1-model_v4 | GT2 | 25 | 424 | 6 | 397 | 0.5333 |
0.7825 |
| QRK05458.1 | GT4 | 23 | 434 | 267 | 988 | 0.5205 |
0.8034 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0U5F758 | GT2 | 19 | 420 | 2 | 402 | 0.5816 |
0.7681 |
| V4JBH5 | GT2 | 23 | 424 | 1 | 398 | 0.5621 |
0.7918 |
| A0A9J7AXY3 | GT2 | 20 | 427 | 2 | 399 | 0.5576 |
0.7752 |
| A0A2I6S8V6 | GT2 | 25 | 430 | 650 | 1067 | 0.5549 |
0.8435 |
| A0A0H3KC95 | GT2 | 18 | 424 | 3 | 405 | 0.5529 |
0.7794 |
| A0A1I7GMF6 | GT2 | 24 | 427 | 667 | 1083 | 0.5507 |
0.8446 |
| A0A974WXG9 | GT4 | 24 | 421 | 672 | 1078 | 0.5505 |
0.8602 |
| W8KPG0 | GT2 | 25 | 424 | 6 | 397 | 0.5333 |
0.7825 |
| QRK05458.1 | GT4 | 23 | 434 | 267 | 988 | 0.5205 |
0.8034 |
| U5MZQ8 | GT2 | 5 | 422 | 145 | 966 | 0.5115 |
0.7502 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7shg-assembly1.cif.gz_A | 28 | 350 | 253 | 591 | 0.5652 |
0.8682 |
| 8a0m-assembly1.cif.gz_B | 22 | 419 | 498 | 875 | 0.5176 |
0.8146 |
| 8a0c-assembly1.cif.gz_A | 22 | 420 | 636 | 1028 | 0.5154 |
0.8163 |
| 8a0m-assembly2.cif.gz_C | 22 | 420 | 632 | 1024 | 0.5142 |
0.8133 |
| 8a0m-assembly1.cif.gz_A | 22 | 420 | 631 | 1023 | 0.5134 |
0.8122 |
| 8a0c-assembly1.cif.gz_B | 22 | 416 | 636 | 1025 | 0.507 |
0.8081 |
| 8a0m-assembly2.cif.gz_D | 22 | 419 | 527 | 886 | 0.4905 |
0.81 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.