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Cluster: HRGMv2_0783_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0783_17 HRGMv2_0783_17_5 2117 3292 + 2.A.119.1.3
pfam HRGMv2_0783_17 HRGMv2_0783_17_6 3316 3552 + Thioredoxin_3
pfam HRGMv2_0783_17 HRGMv2_0783_17_7 3569 4003 + LMWPc
CAZyme HRGMv2_0783_17 HRGMv2_0783_17_8 4100 5734 - GH123
NULL(UNKNOWN) HRGMv2_0783_17 HRGMv2_0783_17_9 5797 11442 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0783_17 HRGMv2_0783_17_10 11465 13330 - GH136
NULL(UNKNOWN) HRGMv2_0783_17 HRGMv2_0783_17_11 13356 13844 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0783_17 HRGMv2_0783_17_12 13841 15517 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0783_17 HRGMv2_0783_17_13 15609 16487 - 3.A.1.1.29
Gene ID: HRGMv2_0783_17_5
Type: TC
Location: 2117 - 3292 (+)
Gene ID: HRGMv2_0783_17_6
Type: pfam
Location: 3316 - 3552 (+)
Gene ID: HRGMv2_0783_17_7
Type: pfam
Location: 3569 - 4003 (+)
Gene ID: HRGMv2_0783_17_8
Type: CAZyme
Location: 4100 - 5734 (-)
Gene ID: HRGMv2_0783_17_9
Type:
Location: 5797 - 11442 (-)
Gene ID: HRGMv2_0783_17_10
Type: CAZyme
Location: 11465 - 13330 (-)
Gene ID: HRGMv2_0783_17_11
Type:
Location: 13356 - 13844 (-)
Gene ID: HRGMv2_0783_17_12
Type:
Location: 13841 - 15517 (-)
Gene ID: HRGMv2_0783_17_13
Type: TC
Location: 15609 - 16487 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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