PROTEIN: HRGMv2_0783_17_12
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Protein File & Metadata
Source:
HRGMv2_0783_17_12.pdb
Genome ID:
Protein ID:
HRGMv2_0783_17_12
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Protein Sequence
MKKTAAAILA GVLSIAMLFA CAGCGNRTTE NGGGGGNTNV NRPAGTKIVI YAGGSSEFSW 60 VAGSEETEVI EYIENAYWED TGKSLDFEIA YLGEDMQTKL ASELAAGSQV DIVISHTRGG 120 QGVDDKLKGE DSHYNLYDAI YDYAPNLYEA VKGAPLNCMT TVNNDVVGIP SVISPYKFGI 180 LVRKDYMEAC GYTDDPAKAG TPFKDGKTYE LVDNLDTFAD MCRAMNEITG SSYAVTGAAW 240 DLEKVLTLGA YGDAGYFSSA LVEENGKELI MTGGSTQAYK EVLSLEYEWA TTGVISKDGN 300 SILLEEGESI FISGKTGVFV LDPTIQHLIK VARMTKNNDP DAEFTVLGPL KAHKDSPDDQ 360 KGFMRNPTAT FAAAITGSST YVKEIMGFLN WVYASEDNYN LCRYGVEGEH WVDNGDGTYS 420 YPEGKESYAT EAPYSGILTL VENQNMSNLI YDGYTEEELH WINDIAGNPE NYIDNDVMDY 480 LFVSTDSYNT ITANAGATLY QMAVDAWTGK TDPLSLTSGG VTVFDSVASA YNRATLEVQE 540 YYTTQYKTMK AQRELELQ 558
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CZN8-F1-model_v4 | 21 | 552 | 13 | 502 | 0.7066 |
0.7797 |
| AF-A0A133D019-F1-model_v4 | 24 | 551 | 26 | 485 | 0.7046 |
0.8075 |
| AF-Q7AQ51-F1-model_v4 | 21 | 541 | 23 | 445 | 0.6407 |
0.7607 |
| AF-Q8DRJ6-F1-model_v4 | 42 | 555 | 59 | 514 | 0.6327 |
0.7521 |
| AF-Q8DNU8-F1-model_v4 | 42 | 541 | 37 | 440 | 0.629 |
0.7753 |
| AF-P59214-F1-model_v4 | 43 | 542 | 39 | 423 | 0.6179 |
0.7781 |
| AF-K0F002-F1-model_v4 | 44 | 538 | 46 | 439 | 0.6162 |
0.774 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 43 | 552 | 44 | 506 | 0.7345 |
0.8515 |
| AF-A0A7U1BNH7-F1-model_v4 | GH10 | 42 | 547 | 27 | 745 | 0.5095 |
0.644 |
| A0A9Q8PNJ5 | GH4 | 5 | 541 | 407 | 866 | 0.4976 |
0.7237 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A0M1Q963 | GH43_11 | 43 | 552 | 44 | 506 | 0.7345 |
0.8515 |
| K8EJG7 | CBM50 , CE4 | 43 | 541 | 33 | 416 | 0.6288 |
0.7885 |
| A0A7U1BNH7 | GH10 | 42 | 547 | 27 | 745 | 0.5095 |
0.644 |
| A0A9Q8PNJ5 | GH4 | 5 | 541 | 407 | 866 | 0.4976 |
0.7237 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3vlw-assembly2.cif.gz_B | 37 | 551 | 1 | 489 | 0.7396 |
0.8051 |
| 5h6u-assembly1.cif.gz_A | 40 | 551 | 2 | 487 | 0.7373 |
0.8056 |
| 6jhx-assembly2.cif.gz_B | 40 | 548 | 5 | 483 | 0.7365 |
0.8123 |
| 4tqu-assembly1.cif.gz_Q | 37 | 554 | 2 | 492 | 0.7362 |
0.8011 |
| 5xs8-assembly1.cif.gz_A | 45 | 546 | 1 | 474 | 0.7352 |
0.8106 |
| 6fth-assembly1.cif.gz_A | 41 | 552 | 1 | 496 | 0.7261 |
0.7859 |
| 5suo-assembly1.cif.gz_A | 45 | 551 | 1 | 451 | 0.7194 |
0.8117 |
| 3omb-assembly1.cif.gz_A | 41 | 551 | 5 | 503 | 0.7146 |
0.7746 |
| 5g62-assembly2.cif.gz_B | 45 | 554 | 1 | 491 | 0.7071 |
0.7693 |
| 5g5y-assembly1.cif.gz_A | 42 | 556 | 1 | 494 | 0.7003 |
0.7615 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37966-F1-model_v4 | 43 | 551 | 34 | 502 | 0.7371 |
0.8411 |
| AF-A0A0H2URD6-F1-model_v4 | 40 | 556 | 43 | 538 | 0.6867 |
0.7719 |
| AF-Q795R2-F1-model_v4 | 42 | 551 | 39 | 498 | 0.6754 |
0.7852 |
| AF-Q8FVS7-F1-model_v4 | 42 | 541 | 22 | 411 | 0.6644 |
0.8153 |
| AF-Q2YKZ9-F1-model_v4 | 42 | 541 | 22 | 411 | 0.6633 |
0.814 |
| AF-Q578M8-F1-model_v4 | 42 | 541 | 22 | 411 | 0.6633 |
0.814 |
| AF-A0A0H2UMY0-F1-model_v4 | 21 | 555 | 26 | 491 | 0.6536 |
0.7485 |
| AF-O07009-F1-model_v4 | 42 | 545 | 34 | 421 | 0.6321 |
0.7887 |
| AF-P59214-F1-model_v4 | 43 | 542 | 39 | 423 | 0.6179 |
0.7781 |
| AF-P59213-F1-model_v4 | 43 | 542 | 39 | 423 | 0.6177 |
0.7776 |