Cluster: HRGMv2_0730_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0730
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0730_28 | HRGMv2_0730_28_13 | 10699 | 11217 | - | 1.A.22.1.8 |
| pfam | HRGMv2_0730_28 | HRGMv2_0730_28_14 | 11235 | 11711 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| pfam | HRGMv2_0730_28 | HRGMv2_0730_28_15 | 11888 | 13234 | - | ELFV_dehydrog | ELFV_dehydrog_N |
| TC | HRGMv2_0730_28 | HRGMv2_0730_28_16 | 13440 | 14813 | + | 2.A.38.4.3 |
| TC | HRGMv2_0730_28 | HRGMv2_0730_28_17 | 14826 | 15503 | + | 2.A.38.4.4 |
| NULL(UNKNOWN) | HRGMv2_0730_28 | HRGMv2_0730_28_18 | 15576 | 16070 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0730_28 | HRGMv2_0730_28_19 | 16186 | 17223 | - | GT28 |
Gene ID: HRGMv2_0730_28_13
Type: TC
Location: 10699 - 11217 (-)
Type: TC
Location: 10699 - 11217 (-)
Gene ID: HRGMv2_0730_28_14
Type: pfam
Location: 11235 - 11711 (-)
Type: pfam
Location: 11235 - 11711 (-)
Gene ID: HRGMv2_0730_28_15
Type: pfam
Location: 11888 - 13234 (-)
Type: pfam
Location: 11888 - 13234 (-)
Gene ID: HRGMv2_0730_28_16
Type: TC
Location: 13440 - 14813 (+)
Type: TC
Location: 13440 - 14813 (+)
Gene ID: HRGMv2_0730_28_17
Type: TC
Location: 14826 - 15503 (+)
Type: TC
Location: 14826 - 15503 (+)
Gene ID: HRGMv2_0730_28_18
Type:
Location: 15576 - 16070 (-)
Type:
Location: 15576 - 16070 (-)
Gene ID: HRGMv2_0730_28_19
Type: CAZyme
Location: 16186 - 17223 (-)
Type: CAZyme
Location: 16186 - 17223 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium gallicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.