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Cluster: HRGMv2_0730_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0730_14 HRGMv2_0730_14_12 9164 12157 + GH3
NULL(UNKNOWN) HRGMv2_0730_14 HRGMv2_0730_14_13 12275 12784 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0730_14 HRGMv2_0730_14_14 12875 13804 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0730_14 HRGMv2_0730_14_15 13875 15269 - 2.A.66.1.37
pfam HRGMv2_0730_14 HRGMv2_0730_14_16 15385 16872 + Acetyltransf_1 | VCA0040-like | Acetyltransf_3
TC HRGMv2_0730_14 HRGMv2_0730_14_17 16874 17380 - 9.B.156.3.1
TC HRGMv2_0730_14 HRGMv2_0730_14_18 17377 17994 - 9.B.156.3.1
pfam HRGMv2_0730_14 HRGMv2_0730_14_19 18091 20025 + tRNA-synt_1 | tRNA-synt_1 | tRNA-synt_1e | tRNA_bind | tRNA-synt_1g | tRNA-synt_1g | Anticodon_3
NULL(UNKNOWN) HRGMv2_0730_14 HRGMv2_0730_14_20 20187 20921 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0730_14 HRGMv2_0730_14_21 20991 21794 + CE4
pfam HRGMv2_0730_14 HRGMv2_0730_14_22 21865 22470 - Rubrerythrin
pfam HRGMv2_0730_14 HRGMv2_0730_14_23 22554 23501 + Ldh_1_N | Ldh_1_C
TC HRGMv2_0730_14 HRGMv2_0730_14_24 23790 24479 + 9.B.143.2.3
CAZyme HRGMv2_0730_14 HRGMv2_0730_14_25 24684 25874 + GT4
Gene ID: HRGMv2_0730_14_12
Type: CAZyme
Location: 9164 - 12157 (+)
Gene ID: HRGMv2_0730_14_13
Type:
Location: 12275 - 12784 (+)
Gene ID: HRGMv2_0730_14_14
Type:
Location: 12875 - 13804 (+)
Gene ID: HRGMv2_0730_14_15
Type: TC
Location: 13875 - 15269 (-)
Gene ID: HRGMv2_0730_14_16
Type: pfam
Location: 15385 - 16872 (+)
Gene ID: HRGMv2_0730_14_17
Type: TC
Location: 16874 - 17380 (-)
Gene ID: HRGMv2_0730_14_18
Type: TC
Location: 17377 - 17994 (-)
Gene ID: HRGMv2_0730_14_19
Type: pfam
Location: 18091 - 20025 (+)
Gene ID: HRGMv2_0730_14_20
Type:
Location: 20187 - 20921 (+)
Gene ID: HRGMv2_0730_14_21
Type: CAZyme
Location: 20991 - 21794 (+)
Gene ID: HRGMv2_0730_14_22
Type: pfam
Location: 21865 - 22470 (-)
Gene ID: HRGMv2_0730_14_23
Type: pfam
Location: 22554 - 23501 (+)
Gene ID: HRGMv2_0730_14_24
Type: TC
Location: 23790 - 24479 (+)
Gene ID: HRGMv2_0730_14_25
Type: CAZyme
Location: 24684 - 25874 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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