Cluster: HRGMv2_0730_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0730
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0730_57 | HRGMv2_0730_57_9 | 7171 | 10104 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_0730_57 | HRGMv2_0730_57_10 | 10255 | 10866 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0730_57 | HRGMv2_0730_57_11 | 10897 | 11037 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0730_57 | HRGMv2_0730_57_12 | 11099 | 11641 | - | 3.A.1.17.6 |
Gene ID: HRGMv2_0730_57_9
Type: CAZyme
Location: 7171 - 10104 (+)
Type: CAZyme
Location: 7171 - 10104 (+)
Gene ID: HRGMv2_0730_57_10
Type:
Location: 10255 - 10866 (-)
Type:
Location: 10255 - 10866 (-)
Gene ID: HRGMv2_0730_57_11
Type:
Location: 10897 - 11037 (-)
Type:
Location: 10897 - 11037 (-)
Gene ID: HRGMv2_0730_57_12
Type: TC
Location: 11099 - 11641 (-)
Type: TC
Location: 11099 - 11641 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
Protoclostridium
Species
Protoclostridium gallicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.