Cluster: HRGMv2_0729_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0729
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0729_34 | HRGMv2_0729_34_2 | 913 | 2541 | + | 2.A.1.42.2 |
| CAZyme | HRGMv2_0729_34 | HRGMv2_0729_34_3 | 2654 | 5731 | + | GH106 |
| TF | HRGMv2_0729_34 | HRGMv2_0729_34_4 | 6050 | 7039 | - | LacI |
| NULL(UNKNOWN) | HRGMv2_0729_34 | HRGMv2_0729_34_5 | 7242 | 8138 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0729_34 | HRGMv2_0729_34_6 | 8181 | 9542 | + | GH180 |
Gene ID: HRGMv2_0729_34_2
Type: TC
Location: 913 - 2541 (+)
Type: TC
Location: 913 - 2541 (+)
Gene ID: HRGMv2_0729_34_3
Type: CAZyme
Location: 2654 - 5731 (+)
Type: CAZyme
Location: 2654 - 5731 (+)
Gene ID: HRGMv2_0729_34_4
Type: TF
Location: 6050 - 7039 (-)
Type: TF
Location: 6050 - 7039 (-)
Gene ID: HRGMv2_0729_34_5
Type:
Location: 7242 - 8138 (+)
Type:
Location: 7242 - 8138 (+)
Gene ID: HRGMv2_0729_34_6
Type: CAZyme
Location: 8181 - 9542 (+)
Type: CAZyme
Location: 8181 - 9542 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Pumilibacteraceae
Genus
UBA10677
Species
UBA10677 sp900553005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.