PROTEIN: HRGMv2_0729_34_5
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Protein File & Metadata
Source:
HRGMv2_0729_34_5.pdb
Genome ID:
Protein ID:
HRGMv2_0729_34_5
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Protein Sequence
MGYAYIGIIM VCRVVQNLCS KNISMVLPVS LRGRLDYLTF SKGVSAAFAL ALLIFAGSFD 60 SLDSLSVMLA SISGLVLALN TIFSSVAMQS GTVALCSMFS TAGLIIPCIA GALFFNESMS 120 VWQWCGVAVF LFAAYLLVSS SKSAKPAFSL KTMLLLCIVL LLNGATMLCQ KLFTFFSPDG 180 SVSVFSLFTF LVPAALCGLA VSAARLAPAR SLMNGCEVLS GKLFFFGAIG AAALFFVNQL 240 ATEATKLVPS AVLFTFINGG NTLIAAIIGA AVFKEKLGVK GVAGIIIGIA SLIIIKAL 298
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9I5Z7-F1-model_v4 | 1 | 297 | 2 | 276 | 0.8284 |
0.8849 |
| AF-Q2G1P2-F1-model_v4 | 1 | 298 | 7 | 288 | 0.8172 |
0.8739 |
| AF-Q9HYN8-F1-model_v4 | 1 | 298 | 6 | 288 | 0.815 |
0.8722 |
| AF-A0A0H3GK88-F1-model_v4 | 1 | 298 | 5 | 289 | 0.8141 |
0.8682 |
| AF-Q5F951-F1-model_v4 | 3 | 298 | 1 | 282 | 0.8117 |
0.8681 |
| AF-A0A132Z592-F1-model_v4 | 1 | 298 | 1 | 285 | 0.8114 |
0.8539 |
| AF-Q09875-F1-model_v4 | 3 | 298 | 1 | 318 | 0.8099 |
0.8717 |
| AF-P0ABT8-F1-model_v4 | 1 | 298 | 10 | 291 | 0.8072 |
0.8781 |
| AF-Q9HXB6-F1-model_v4 | 1 | 298 | 1 | 287 | 0.8024 |
0.8608 |
| AF-A0A0N4U1S1-F1-model_v4 | 1 | 298 | 4 | 287 | 0.8005 |
0.8502 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 298 | 376 | 665 | 0.583 |
0.8415 |
| AF-A0A3P6AF83-F1-model_v4 | GH28 | 1 | 298 | 450 | 766 | 0.5697 |
0.8342 |
| AF-Q5B3N6-F1-model_v4 | GT25 | 1 | 298 | 515 | 798 | 0.4976 |
0.7642 |
| AF-A0A4D6KI88-F1-model_v4 | GH1 | 1 | 298 | 96 | 413 | 0.4936 |
0.7597 |
| AF-A0A7H8KSK8-F1-model_v4 | GT51 | 1 | 298 | 820 | 1110 | 0.4854 |
0.7905 |
| A0A8S2ASG7 | CBM45 | 1 | 298 | 1352 | 1667 | 0.4237 |
0.7492 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WJH36882.1 | GH36 | 1 | 298 | 376 | 665 | 0.583 |
0.8415 |
| A0A3P6AF83 | GH28 | 1 | 298 | 450 | 766 | 0.5697 |
0.8342 |
| Q5B3N6 | GT25 | 1 | 298 | 515 | 798 | 0.4976 |
0.7642 |
| A0A4D6KI88 | GH1 | 1 | 298 | 96 | 413 | 0.4936 |
0.7597 |
| A0A7H8KSK8 | GT51 | 1 | 298 | 820 | 1110 | 0.4854 |
0.7905 |
| A0A8S2ASG7 | CBM45 | 1 | 298 | 1352 | 1667 | 0.4237 |
0.7492 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7b0k-assembly1.cif.gz_A | 2 | 297 | 1 | 255 | 0.8057 |
0.8885 |
| 7paf-assembly1.cif.gz_D | 2 | 296 | 1 | 278 | 0.7979 |
0.85 |
| 5i20-assembly4.cif.gz_D | 1 | 298 | 4 | 280 | 0.7943 |
0.8533 |
| 5i20-assembly1.cif.gz_A | 1 | 298 | 4 | 282 | 0.7823 |
0.8443 |
| 5i20-assembly3.cif.gz_C | 1 | 298 | 4 | 279 | 0.781 |
0.8441 |
| 5i20-assembly2.cif.gz_B | 1 | 298 | 4 | 277 | 0.7786 |
0.8429 |
| 5ogk-assembly1.cif.gz_B | 1 | 298 | 2 | 292 | 0.7434 |
0.7908 |
| 5oge-assembly3.cif.gz_H-2 | 1 | 298 | 5 | 291 | 0.7432 |
0.8026 |
| 5ogk-assembly2.cif.gz_C | 1 | 298 | 3 | 286 | 0.7422 |
0.8028 |
| 5ogk-assembly1.cif.gz_A | 1 | 298 | 2 | 284 | 0.7418 |
0.8024 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O34416-F1-model_v4 | 1 | 298 | 3 | 286 | 0.8295 |
0.8816 |
| AF-F8JJ22-F1-model_v4 | 1 | 298 | 5 | 283 | 0.8171 |
0.8889 |
| AF-Q09875-F1-model_v4 | 3 | 298 | 1 | 318 | 0.8099 |
0.8717 |
| AF-P0ABT9-F1-model_v4 | 1 | 298 | 7 | 291 | 0.8074 |
0.8708 |
| AF-P0ABT8-F1-model_v4 | 1 | 298 | 10 | 291 | 0.8072 |
0.8781 |
| AF-P96680-F1-model_v4 | 1 | 298 | 7 | 286 | 0.8037 |
0.885 |
| AF-O32256-F1-model_v4 | 1 | 298 | 4 | 288 | 0.8004 |
0.8679 |
| AF-P44170-F1-model_v4 | 3 | 298 | 1 | 287 | 0.7986 |
0.8417 |
| AF-Q945L4-F1-model_v4 | 1 | 298 | 9 | 310 | 0.7941 |
0.8639 |
| AF-O29740-F1-model_v4 | 1 | 298 | 1 | 287 | 0.7932 |
0.8379 |