Cluster: HRGMv2_0720_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0720
- CGC Family ID: CGCFAM_02369
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0720_42 | HRGMv2_0720_42_11 | 9774 | 11072 | - | 2.A.37.3.3 |
| pfam | HRGMv2_0720_42 | HRGMv2_0720_42_12 | 11374 | 11838 | + | Alg14 |
| pfam | HRGMv2_0720_42 | HRGMv2_0720_42_13 | 11835 | 12320 | + | Glyco_tran_28_C |
| CAZyme | HRGMv2_0720_42 | HRGMv2_0720_42_14 | 12325 | 13416 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_0720_42 | HRGMv2_0720_42_15 | 13564 | 14223 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0720_42 | HRGMv2_0720_42_16 | 14216 | 15292 | + | GT4 |
Gene ID: HRGMv2_0720_42_11
Type: TC
Location: 9774 - 11072 (-)
Type: TC
Location: 9774 - 11072 (-)
Gene ID: HRGMv2_0720_42_12
Type: pfam
Location: 11374 - 11838 (+)
Type: pfam
Location: 11374 - 11838 (+)
Gene ID: HRGMv2_0720_42_13
Type: pfam
Location: 11835 - 12320 (+)
Type: pfam
Location: 11835 - 12320 (+)
Gene ID: HRGMv2_0720_42_14
Type: CAZyme
Location: 12325 - 13416 (+)
Type: CAZyme
Location: 12325 - 13416 (+)
Gene ID: HRGMv2_0720_42_15
Type:
Location: 13564 - 14223 (+)
Type:
Location: 13564 - 14223 (+)
Gene ID: HRGMv2_0720_42_16
Type: CAZyme
Location: 14216 - 15292 (+)
Type: CAZyme
Location: 14216 - 15292 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Species
Aphodomorpha sp019416935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0720_42_11 | vegetarian > vegan | 1.20604 | 0.00699 |