PROTEIN: HRGMv2_0720_42_15
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_0720_42_15.pdb
Genome ID:
Protein ID:
HRGMv2_0720_42_15
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MLMQLLCADV RAAAEGSRGR VLSTIFPDAN WKAARHHRIA HALHARFGLR VLPHDLTCRS 60 RVRFSIDIDR RAVIGPGFVI RRAVGVVVGR DVRAGSRLSL HQGVTLGGSN GKARELSTDL 120 GVFLGAMQPV LGDNASILTG ACVFGPTASV PNAVIGAGAL VFTDVPADTV ALQKRQTLLR 180 PAGTPAVDCL GESPAVHAAE PAAEACSGPF TGREEAGHA 219
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71405-F1-model_v4 | 2 | 182 | 1 | 169 | 0.779 |
0.8994 |
| AF-A0A132Z2H2-F1-model_v4 | 3 | 200 | 1 | 171 | 0.7754 |
0.9054 |
| AF-A0A077ZMK0-F1-model_v4 | 3 | 200 | 1 | 171 | 0.7665 |
0.8938 |
| AF-H9L4C3-F1-model_v4 | 6 | 183 | 1 | 162 | 0.7544 |
0.8832 |
| AF-P0ACC9-F1-model_v4 | 6 | 181 | 1 | 161 | 0.7355 |
0.8668 |
| AF-Q8DQS9-F1-model_v4 | 3 | 201 | 1 | 172 | 0.7167 |
0.8936 |
| AF-Q2G2M7-F1-model_v4 | 1 | 200 | 2 | 174 | 0.7127 |
0.9034 |
| AF-X8FD92-F1-model_v4 | 2 | 206 | 1 | 178 | 0.7089 |
0.8975 |
| AF-Q0PAC7-F1-model_v4 | 1 | 200 | 2 | 175 | 0.7082 |
0.8863 |
| AF-Q7AQF4-F1-model_v4 | 2 | 206 | 1 | 179 | 0.7073 |
0.8895 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A447LR74-F1-model_v4 | GT2 | 1 | 182 | 31 | 234 | 0.6226 |
0.7837 |
| BCS39092.1 | GT4 | 1 | 183 | 192 | 371 | 0.5672 |
0.8707 |
| AF-A0A250IFU7-F1-model_v4 | GT2 | 1 | 204 | 357 | 532 | 0.5066 |
0.8922 |
| AF-A0A250IU01-F1-model_v4 | GT2 | 1 | 203 | 357 | 532 | 0.5035 |
0.8866 |
| BDV43052.1 | GT4 | 2 | 205 | 1 | 177 | 0.5013 |
0.8971 |
| AF-A0A0K1Q0U6-F1-model_v4 | GT2 | 1 | 191 | 357 | 560 | 0.4941 |
0.8188 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A447LR74 | GT2 | 1 | 182 | 31 | 234 | 0.6226 |
0.7837 |
| BCS39092.1 | GT4 | 1 | 183 | 192 | 371 | 0.5672 |
0.8707 |
| A0A250IU01 | GT2 | 1 | 203 | 357 | 532 | 0.5035 |
0.8866 |
| BDV43052.1 | GT4 | 2 | 205 | 1 | 177 | 0.5013 |
0.8971 |
| A0A0K1Q0U6 | GT2 | 1 | 191 | 357 | 560 | 0.4941 |
0.8188 |
| K9T6P7 | GT2 | 1 | 208 | 332 | 508 | 0.4869 |
0.8382 |
| A0A7D3XW08 | PL12 | 25 | 219 | 1 | 336 | 0.437 |
0.7384 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6jvu-assembly1.cif.gz_C | 1 | 206 | 71 | 252 | 0.6877 |
0.8928 |
| 4hzc-assembly2.cif.gz_I | 1 | 203 | 71 | 244 | 0.6835 |
0.9119 |
| 4hzc-assembly2.cif.gz_J | 1 | 203 | 71 | 244 | 0.6833 |
0.9113 |
| 4hzc-assembly1.cif.gz_E | 1 | 203 | 71 | 243 | 0.6828 |
0.9139 |
| 4h7o-assembly1.cif.gz_A | 1 | 206 | 72 | 253 | 0.6827 |
0.8944 |
| 8i04-assembly1.cif.gz_A | 1 | 206 | 72 | 253 | 0.6825 |
0.8954 |
| 4hzc-assembly2.cif.gz_G | 1 | 203 | 71 | 242 | 0.6813 |
0.9151 |
| 1ssq-assembly1.cif.gz_D | 1 | 206 | 72 | 253 | 0.6781 |
0.8874 |
| 1ssm-assembly1.cif.gz_E | 1 | 197 | 72 | 240 | 0.6772 |
0.9235 |
| 3gvd-assembly1.cif.gz_F | 1 | 206 | 76 | 257 | 0.6769 |
0.8926 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71405-F1-model_v4 | 2 | 182 | 1 | 169 | 0.779 |
0.8994 |
| AF-Q9ZK14-F1-model_v4 | 1 | 182 | 1 | 169 | 0.7783 |
0.8988 |
| AF-P0ACD1-F1-model_v4 | 6 | 182 | 1 | 162 | 0.7599 |
0.8891 |
| AF-P0ACD0-F1-model_v4 | 6 | 181 | 1 | 161 | 0.7373 |
0.8689 |
| AF-P0ACC9-F1-model_v4 | 6 | 181 | 1 | 161 | 0.7355 |
0.8668 |
| AF-Q5HRM4-F1-model_v4 | 2 | 206 | 1 | 181 | 0.7255 |
0.8769 |
| AF-Q65PC9-F1-model_v4 | 1 | 200 | 1 | 173 | 0.7168 |
0.9102 |
| AF-P67764-F1-model_v4 | 2 | 186 | 1 | 194 | 0.7145 |
0.8464 |
| AF-Q5HIE6-F1-model_v4 | 2 | 200 | 1 | 172 | 0.7138 |
0.9056 |
| AF-Q8CTU2-F1-model_v4 | 2 | 200 | 1 | 172 | 0.7137 |
0.9055 |