Cluster: HRGMv2_0713_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: fructan
- Genome ID: HRGMv2_0713
- CGC Family ID: CGCFAM_00035
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0713_41 | HRGMv2_0713_41_3 | 2700 | 3704 | + | 3.A.1.1.10 |
| TC | HRGMv2_0713_41 | HRGMv2_0713_41_4 | 3717 | 4634 | + | 3.A.1.1.29 |
| NULL(UNKNOWN) | HRGMv2_0713_41 | HRGMv2_0713_41_5 | 4659 | 6311 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0713_41 | HRGMv2_0713_41_6 | 6331 | 8124 | + | Bact_surface_Ig-like |
| CAZyme | HRGMv2_0713_41 | HRGMv2_0713_41_7 | 8194 | 9564 | + | GH32 |
| CAZyme | HRGMv2_0713_41 | HRGMv2_0713_41_8 | 9583 | 11076 | + | GH32 |
Gene ID: HRGMv2_0713_41_3
Type: TC
Location: 2700 - 3704 (+)
Type: TC
Location: 2700 - 3704 (+)
Gene ID: HRGMv2_0713_41_4
Type: TC
Location: 3717 - 4634 (+)
Type: TC
Location: 3717 - 4634 (+)
Gene ID: HRGMv2_0713_41_5
Type:
Location: 4659 - 6311 (+)
Type:
Location: 4659 - 6311 (+)
Gene ID: HRGMv2_0713_41_6
Type: pfam
Location: 6331 - 8124 (+)
Type: pfam
Location: 6331 - 8124 (+)
Gene ID: HRGMv2_0713_41_7
Type: CAZyme
Location: 8194 - 9564 (+)
Type: CAZyme
Location: 8194 - 9564 (+)
Gene ID: HRGMv2_0713_41_8
Type: CAZyme
Location: 9583 - 11076 (+)
Type: CAZyme
Location: 9583 - 11076 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Borkfalkia
Species
Borkfalkia ceftriaxoniphila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0713_41_3 | vegetarian > omnivore | 1.35308 | 0.04163 |