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Cluster: HRGMv2_0712_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0712_1 HRGMv2_0712_1_128 133720 135603 + CBM48 | GH13_9
pfam HRGMv2_0712_1 HRGMv2_0712_1_129 135607 136803 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_0712_1 HRGMv2_0712_1_130 136805 137917 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_0712_1 HRGMv2_0712_1_131 137930 139444 + GT5
CAZyme HRGMv2_0712_1 HRGMv2_0712_1_132 139457 141877 + GT35
CAZyme HRGMv2_0712_1 HRGMv2_0712_1_133 141881 143677 + GH13_39
pfam HRGMv2_0712_1 HRGMv2_0712_1_134 143674 144354 + DNA_alkylation
pfam HRGMv2_0712_1 HRGMv2_0712_1_135 144351 146525 + S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5
TC HRGMv2_0712_1 HRGMv2_0712_1_136 146597 146830 + 3.D.1.6.4
Gene ID: HRGMv2_0712_1_128
Type: CAZyme
Location: 133720 - 135603 (+)
Gene ID: HRGMv2_0712_1_129
Type: pfam
Location: 135607 - 136803 (+)
Gene ID: HRGMv2_0712_1_130
Type: pfam
Location: 136805 - 137917 (+)
Gene ID: HRGMv2_0712_1_131
Type: CAZyme
Location: 137930 - 139444 (+)
Gene ID: HRGMv2_0712_1_132
Type: CAZyme
Location: 139457 - 141877 (+)
Gene ID: HRGMv2_0712_1_133
Type: CAZyme
Location: 141881 - 143677 (+)
Gene ID: HRGMv2_0712_1_134
Type: pfam
Location: 143674 - 144354 (+)
Gene ID: HRGMv2_0712_1_135
Type: pfam
Location: 144351 - 146525 (+)
Gene ID: HRGMv2_0712_1_136
Type: TC
Location: 146597 - 146830 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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