Cluster: HRGMv2_0708_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0708
- CGC Family ID: CGCFAM_00038
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0708_5 | HRGMv2_0708_5_14 | 14731 | 15414 | + | 9.B.18.1.1 |
| CAZyme | HRGMv2_0708_5 | HRGMv2_0708_5_15 | 15407 | 16153 | + | GT2 |
| STP | HRGMv2_0708_5 | HRGMv2_0708_5_16 | 16171 | 17616 | + | B12-binding |
| NULL(UNKNOWN) | HRGMv2_0708_5 | HRGMv2_0708_5_17 | 17613 | 18659 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0708_5 | HRGMv2_0708_5_18 | 18710 | 19795 | + | GT4 |
| CAZyme | HRGMv2_0708_5 | HRGMv2_0708_5_19 | 19811 | 20905 | + | GT4 |
Gene ID: HRGMv2_0708_5_14
Type: TC
Location: 14731 - 15414 (+)
Type: TC
Location: 14731 - 15414 (+)
Gene ID: HRGMv2_0708_5_15
Type: CAZyme
Location: 15407 - 16153 (+)
Type: CAZyme
Location: 15407 - 16153 (+)
Gene ID: HRGMv2_0708_5_16
Type: STP
Location: 16171 - 17616 (+)
Type: STP
Location: 16171 - 17616 (+)
Gene ID: HRGMv2_0708_5_17
Type:
Location: 17613 - 18659 (+)
Type:
Location: 17613 - 18659 (+)
Gene ID: HRGMv2_0708_5_18
Type: CAZyme
Location: 18710 - 19795 (+)
Type: CAZyme
Location: 18710 - 19795 (+)
Gene ID: HRGMv2_0708_5_19
Type: CAZyme
Location: 19811 - 20905 (+)
Type: CAZyme
Location: 19811 - 20905 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-138
Genus
Aphodomorpha
Species
Aphodomorpha sp900540495
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.