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PROTEIN: HRGMv2_0708_5_17

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Protein File & Metadata
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Source:
HRGMv2_0708_5_17.pdb
Genome ID:
HRGMv2_0708
Protein ID:
HRGMv2_0708_5_17

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Detailed structural information will appear here after analysis...

Protein Sequence 
MSWLTTAAYV   LFFLSVFIPV   YTYGLYPLIL   LFFRKKQYES   NDVFLPEVSV   LVVPNKDENL 60
TNEKLESLRN   LKYPNYEVLT   CEKGICACFP   VIEIDHTQKT   SELNALLKAS   RGDIILFTDH 120
KTPIDSLAVG   CLVRHFADNR   VGCVVGQLRS   DSPSVFWKYE   NYIRWQEGKA   GRVSGANSAI 180
YAVRKEYVKS   IPENIINVEF   FVPTVVQQEG   HDVLFDSDAV   AYEQPGAQAD   HVSDGAGYYQ 240
ALRVFWRMLL   PRKGSFVYWS   HRVLKWLTPF   CMIMAFISSA   ICSFTHLLTA   LVWLFQFIGY 300
GLVCFYYQWE   KARFDLRPKG   LLHKFFDIVV   YFVELNVSYI   VGFFKQKK 348
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CHH9-F1-model_v4 1 348 9 422 0.7153 0.8089
AF-Q9RQP9-F1-model_v4 9 348 1 394 0.7039 0.7963
AF-A0A0H3GH44-F1-model_v4 2 348 20 425 0.6906 0.7893
AF-P75905-F1-model_v4 2 348 20 424 0.6838 0.7818
AF-A0A1D6KVP9-F1-model_v4 1 348 10 426 0.6698 0.8089
AF-I1L972-F1-model_v4 2 348 25 436 0.6696 0.8091
AF-I1LZF0-F1-model_v4 1 348 24 436 0.6686 0.8062
AF-Q7PC76-F1-model_v4 2 348 21 433 0.6658 0.8105
AF-I1LCQ9-F1-model_v4 1 348 30 443 0.6628 0.8093
AF-Q67VS7-F1-model_v4 2 348 22 441 0.6625 0.8097
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0G9HEE7-F1-model_v4 GT2 2 348 1 371 0.8752 0.9235
AF-A0A160N5L5-F1-model_v4 GT2 5 348 1 369 0.8725 0.9261
AF-A0A4Y5Z526-F1-model_v4 GT2 4 348 1 370 0.8712 0.9236
AF-A0A6M8V9B4-F1-model_v4 GT2 2 348 1 378 0.8658 0.9257
AF-K0D2Y7-F1-model_v4 GT2 5 348 1 379 0.8648 0.9346
AF-A0A3S9PAR1-F1-model_v4 GT2 3 348 1 379 0.8629 0.9279
AF-A0A6T9Y213-F1-model_v4 GT2 5 348 1 379 0.8625 0.9326
AF-A0A075K240-F1-model_v4 GT2 4 348 1 371 0.8622 0.9156
A0A975EI03 GT2 6 348 1 367 0.8616 0.9189
AF-A0A514BQV5-F1-model_v4 GT2 2 348 1 364 0.8615 0.9076
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0G9HEE7 GT2 2 348 1 371 0.8752 0.9235
A0A6M8V9B4 GT2 2 348 1 378 0.8658 0.9257
A0A975EI03 GT2 6 348 1 367 0.8616 0.9189
WDN87073.1 GT2 4 348 1 373 0.8607 0.9213
A0A7D7ZRC6 GT2 8 348 1 372 0.8594 0.9284
BCS97099.1 GT2 2 348 1 373 0.8594 0.9146
A0A7H4GKW3 GT2 5 348 1 362 0.8577 0.9098
H1XXC6 GT2 6 348 1 371 0.8564 0.9206
A0A4P7JL79 GT2 8 348 1 365 0.8564 0.9216
A0A0K2GFP9 GT2 1 348 1 375 0.8561 0.9116
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6yv9-assembly1.cif.gz_A 5 348 1 343 0.7861 0.8117
7sp8-assembly1.cif.gz_A 9 348 1 414 0.6254 0.7643
7sp7-assembly1.cif.gz_A 9 348 1 419 0.6233 0.7602
7sp6-assembly1.cif.gz_A 8 348 1 416 0.613 0.7448
7spa-assembly1.cif.gz_A 9 348 1 419 0.6099 0.7453
5hea-assembly1.cif.gz_A 45 348 1 260 0.597 0.7185
5ej1-assembly1.cif.gz_A 1 328 79 701 0.5847 0.8386
5ejz-assembly1.cif.gz_A 1 328 79 708 0.5838 0.84
6h4m-assembly3.cif.gz_P 45 299 1 305 0.5682 0.7291
6h4m-assembly4.cif.gz_Q 45 296 1 314 0.5666 0.7461
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P96587-F1-model_v4 5 348 1 404 0.716 0.8062
AF-Q07755-F1-model_v4 1 348 1 388 0.7124 0.7784
AF-Q8GLC5-F1-model_v4 9 348 1 394 0.7075 0.8002
AF-Q5HKQ0-F1-model_v4 9 348 1 394 0.7066 0.7993
AF-Q6GDD8-F1-model_v4 9 348 1 394 0.7065 0.7987
AF-Q99QX3-F1-model_v4 9 348 1 394 0.705 0.7972
AF-Q8NUI7-F1-model_v4 9 348 1 394 0.7042 0.7966
AF-Q6G608-F1-model_v4 9 348 1 394 0.7041 0.7962
AF-Q5HCN1-F1-model_v4 9 348 1 394 0.7041 0.7964
AF-Q9RQP9-F1-model_v4 9 348 1 394 0.7039 0.7963
Download Full SwissProt Results