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Cluster: HRGMv2_0706_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0706_4 HRGMv2_0706_4_40 49715 51106 - GH4
pfam HRGMv2_0706_4 HRGMv2_0706_4_41 51251 51709 - AhpC-TSA | Redoxin
TC HRGMv2_0706_4 HRGMv2_0706_4_42 52005 54686 - 3.A.3.2.21
NULL(UNKNOWN) HRGMv2_0706_4 HRGMv2_0706_4_43 54981 55601 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0706_4 HRGMv2_0706_4_44 55865 56170 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0706_4 HRGMv2_0706_4_45 56315 57784 - 2.A.37.2.3
STP HRGMv2_0706_4 HRGMv2_0706_4_46 59807 60400 - HD
TC HRGMv2_0706_4 HRGMv2_0706_4_47 60751 61995 + 2.A.88.3.1
Gene ID: HRGMv2_0706_4_40
Type: CAZyme
Location: 49715 - 51106 (-)
Gene ID: HRGMv2_0706_4_41
Type: pfam
Location: 51251 - 51709 (-)
Gene ID: HRGMv2_0706_4_42
Type: TC
Location: 52005 - 54686 (-)
Gene ID: HRGMv2_0706_4_43
Type:
Location: 54981 - 55601 (-)
Gene ID: HRGMv2_0706_4_44
Type:
Location: 55865 - 56170 (-)
Gene ID: HRGMv2_0706_4_45
Type: TC
Location: 56315 - 57784 (-)
Gene ID: HRGMv2_0706_4_46
Type: STP
Location: 59807 - 60400 (-)
Gene ID: HRGMv2_0706_4_47
Type: TC
Location: 60751 - 61995 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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