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Cluster: HRGMv2_0706_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0706_2 HRGMv2_0706_2_38 39578 40699 + 3.A.16.1.1
peptidase HRGMv2_0706_2 HRGMv2_0706_2_39 40876 41730 + S01.UNB
TC HRGMv2_0706_2 HRGMv2_0706_2_40 42059 42847 + 3.A.1.122.14
TC HRGMv2_0706_2 HRGMv2_0706_2_41 42930 45638 + 3.A.1.137.2
TF HRGMv2_0706_2 HRGMv2_0706_2_42 45714 46187 + MarR
pfam HRGMv2_0706_2 HRGMv2_0706_2_43 46286 46534 - DUF378
CAZyme HRGMv2_0706_2 HRGMv2_0706_2_44 46736 49153 + GH3
Gene ID: HRGMv2_0706_2_38
Type: TC
Location: 39578 - 40699 (+)
Gene ID: HRGMv2_0706_2_39
Type: peptidase
Location: 40876 - 41730 (+)
Gene ID: HRGMv2_0706_2_40
Type: TC
Location: 42059 - 42847 (+)
Gene ID: HRGMv2_0706_2_41
Type: TC
Location: 42930 - 45638 (+)
Gene ID: HRGMv2_0706_2_42
Type: TF
Location: 45714 - 46187 (+)
Gene ID: HRGMv2_0706_2_43
Type: pfam
Location: 46286 - 46534 (-)
Gene ID: HRGMv2_0706_2_44
Type: CAZyme
Location: 46736 - 49153 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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