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Cluster: HRGMv2_0705_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0705_1 HRGMv2_0705_1_603 682845 683078 - 3.D.1.6.4
pfam HRGMv2_0705_1 HRGMv2_0705_1_604 683128 685308 - S1 | Tex_N | HHH_3 | HHH_7 | YqgF | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5
pfam HRGMv2_0705_1 HRGMv2_0705_1_605 685321 686004 - DNA_alkylation
CAZyme HRGMv2_0705_1 HRGMv2_0705_1_606 686001 687806 - GH13_39
CAZyme HRGMv2_0705_1 HRGMv2_0705_1_607 687810 690230 - GT35
CAZyme HRGMv2_0705_1 HRGMv2_0705_1_608 690291 691901 - GT5
pfam HRGMv2_0705_1 HRGMv2_0705_1_609 691915 693018 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_0705_1 HRGMv2_0705_1_610 693020 694222 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_0705_1 HRGMv2_0705_1_611 694264 696141 - CBM48 | GH13_9
Gene ID: HRGMv2_0705_1_603
Type: TC
Location: 682845 - 683078 (-)
Gene ID: HRGMv2_0705_1_604
Type: pfam
Location: 683128 - 685308 (-)
Gene ID: HRGMv2_0705_1_605
Type: pfam
Location: 685321 - 686004 (-)
Gene ID: HRGMv2_0705_1_606
Type: CAZyme
Location: 686001 - 687806 (-)
Gene ID: HRGMv2_0705_1_607
Type: CAZyme
Location: 687810 - 690230 (-)
Gene ID: HRGMv2_0705_1_608
Type: CAZyme
Location: 690291 - 691901 (-)
Gene ID: HRGMv2_0705_1_609
Type: pfam
Location: 691915 - 693018 (-)
Gene ID: HRGMv2_0705_1_610
Type: pfam
Location: 693020 - 694222 (-)
Gene ID: HRGMv2_0705_1_611
Type: CAZyme
Location: 694264 - 696141 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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