dbCAN HGM

Cluster: HRGMv2_0696_CGC15

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_0696_24	HRGMv2_0696_24_3	1916	4540	+	GH78
NULL(UNKNOWN)	HRGMv2_0696_24	HRGMv2_0696_24_4	4644	6071	+	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_0696_24	HRGMv2_0696_24_5	6260	7168	+	3.A.1.1.1
TC	HRGMv2_0696_24	HRGMv2_0696_24_6	7168	8025	+	3.A.1.1.18
STP	HRGMv2_0696_24	HRGMv2_0696_24_7	8122	9753	+	SBP_bac_1
NULL(UNKNOWN)	HRGMv2_0696_24	HRGMv2_0696_24_8	9792	13019	+	NULL(UNKNOWN) [View Structural Homologs]
TC	HRGMv2_0696_24	HRGMv2_0696_24_9	13420	14454	+	3.A.1.24.1
TC	HRGMv2_0696_24	HRGMv2_0696_24_10	14441	15112	+	3.A.1.24.5
TC	HRGMv2_0696_24	HRGMv2_0696_24_11	15109	16005	+	3.A.1.24.2

Gene ID: HRGMv2_0696_24_3
Type: CAZyme
Location: 1916 - 4540 (+)

Gene ID: HRGMv2_0696_24_4
Type:
Location: 4644 - 6071 (+)

Gene ID: HRGMv2_0696_24_5
Type: TC
Location: 6260 - 7168 (+)

Gene ID: HRGMv2_0696_24_6
Type: TC
Location: 7168 - 8025 (+)

Gene ID: HRGMv2_0696_24_7
Type: STP
Location: 8122 - 9753 (+)

Gene ID: HRGMv2_0696_24_8
Type:
Location: 9792 - 13019 (+)

Gene ID: HRGMv2_0696_24_9
Type: TC
Location: 13420 - 14454 (+)

Gene ID: HRGMv2_0696_24_10
Type: TC
Location: 14441 - 15112 (+)

Gene ID: HRGMv2_0696_24_11
Type: TC
Location: 15109 - 16005 (+)

Taxonomic Lineage

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Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0696_24_9	vegan > omnivore	17.95521	0.01332
HRGMv2_0696_24_9	vegetarian > omnivore	18.16366	0.01678
HRGMv2_0696_24_10	vegan > omnivore	16.95399	0.01332
HRGMv2_0696_24_10	vegetarian > omnivore	18.26665	0.01678
HRGMv2_0696_24_10	vegetarian > vegan	1.31266	0.02650
HRGMv2_0696_24_11	vegan > omnivore	17.33403	0.01332
HRGMv2_0696_24_11	vegetarian > omnivore	18.24457	0.01678