PROTEIN: HRGMv2_0696_24_4
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Protein File & Metadata
Source:
HRGMv2_0696_24_4.pdb
Genome ID:
Protein ID:
HRGMv2_0696_24_4
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Protein Sequence
MKKKILGALM ACSMLFAAGC GGGSGSDGNS GGHGKTLNPE DYVSTEKFIT IADVPPHPVN 60 ELEDYVNLGF SGYILTEDHV KFTENGKITN GYKAALESLK NKGLDVYIRN QYNDPDYFVN 120 SDTSPRTQFN AGGTSDPYVI PERNITTEFK DYPQVKGFYM SDEPDYNKLT RYGKIIDWYN 180 TYYSDTYFHM NLLPSYANQQ NFAGYGYSGY VKQFVSEIVE KVKGKKSICL DNYPYTLEQP 240 GAVRSSYLSD ILLIANTAKA YNDAAADADK AYMGICIQTF KSSTLADITC PAQVSFQLLT 300 GMAVGSKMYE YFLYGSGMGM YGIMTNGEKR IYDHVKTAND KYLGFEKVLN SFDWQGLTAI 360 GAENASDSEN AETFEAISDI TLKNTGVLSL KKSSSRLDMI VGAFKKGETD GYLAVNYSYP 420 GAGKTNTAKL YFENCSSALV YTGTEEGMKV EKVKLVDGIL RLNLGAGEGA FVIPA 475
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A077LDM1-F1-model_v4 | GH39 | 43 | 475 | 30 | 436 | 0.5988 |
0.6853 |
| AF-A0A286REU7-F1-model_v4 | GH39 | 33 | 473 | 22 | 429 | 0.5976 |
0.6769 |
| AF-A0A2K4W218-F1-model_v4 | GH39 | 43 | 475 | 29 | 435 | 0.5958 |
0.6813 |
| AF-A0A7G9P1M8-F1-model_v4 | GH39 | 43 | 472 | 25 | 420 | 0.5956 |
0.6873 |
| AF-A0A4P6QD44-F1-model_v4 | GH39 | 43 | 475 | 29 | 435 | 0.595 |
0.6804 |
| AF-A0A5C1QRN3-F1-model_v4 | GH39 | 44 | 475 | 1 | 447 | 0.5921 |
0.6556 |
| AF-A0A402CSM4-F1-model_v4 | GH39 | 43 | 473 | 30 | 418 | 0.592 |
0.6954 |
| AF-A0A7G9NW89-F1-model_v4 | GH0 | 42 | 475 | 22 | 430 | 0.5912 |
0.6706 |
| A0A974X8W7 | GH39 | 42 | 475 | 41 | 418 | 0.5908 |
0.7077 |
| AF-A0A7Z2QV60-F1-model_v4 | GH39 | 43 | 475 | 25 | 431 | 0.5902 |
0.6796 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| K6AWF3 | GH111 | 44 | 475 | 56 | 503 | 0.6693 |
0.7664 |
| A0A7G9P1M8 | GH39 | 43 | 472 | 25 | 420 | 0.5956 |
0.6873 |
| UGB41918.1 | GH39 | 42 | 475 | 35 | 415 | 0.5954 |
0.7057 |
| A0A5C1QRN3 | GH39 | 44 | 475 | 1 | 447 | 0.5921 |
0.6556 |
| A0A402CSM4 | GH39 | 43 | 473 | 30 | 418 | 0.592 |
0.6954 |
| A0A974X8W7 | GH39 | 42 | 475 | 41 | 418 | 0.5908 |
0.7077 |
| UVO27610.1 | GH39 | 44 | 474 | 41 | 422 | 0.5892 |
0.7068 |
| A0A4P8KZX4 | GH39 | 44 | 475 | 38 | 441 | 0.5879 |
0.6857 |
| Q87TX3 | GH39 | 43 | 475 | 29 | 435 | 0.5875 |
0.6804 |
| A0A1E8Q1H5 | GH27 | 44 | 475 | 41 | 435 | 0.5871 |
0.6891 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1ktb-assembly1.cif.gz_A | 45 | 475 | 7 | 387 | 0.6095 |
0.7 |
| 3tv8-assembly1.cif.gz_A | 44 | 475 | 6 | 389 | 0.6007 |
0.6873 |
| 4fmv-assembly1.cif.gz_A | 37 | 475 | 7 | 386 | 0.598 |
0.6884 |
| 5cxp-assembly1.cif.gz_A-2 | 37 | 475 | 8 | 387 | 0.5967 |
0.6871 |
| 7kmn-assembly1.cif.gz_A | 43 | 475 | 19 | 507 | 0.5736 |
0.6639 |
| 6tbj-assembly8.cif.gz_H | 44 | 475 | 20 | 517 | 0.5732 |
0.6714 |
| 6tbj-assembly3.cif.gz_C | 44 | 475 | 20 | 519 | 0.5726 |
0.6717 |
| 5jaw-assembly2.cif.gz_H-3 | 43 | 475 | 20 | 520 | 0.5711 |
0.6701 |
| 5jaw-assembly2.cif.gz_B | 44 | 475 | 20 | 522 | 0.5701 |
0.6705 |
| 5jaw-assembly1.cif.gz_D-2 | 44 | 475 | 20 | 525 | 0.5697 |
0.6723 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6YK37-F1-model_v4 | 37 | 475 | 41 | 423 | 0.5643 |
0.6718 |