Cluster: HRGMv2_0685_CGC7
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0685
- CGC Family ID: CGCFAM_03205
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0685_2 | HRGMv2_0685_2_17 | 25472 | 26410 | - | 3.A.1.1.6 |
| pfam | HRGMv2_0685_2 | HRGMv2_0685_2_18 | 26426 | 27382 | - | BPD_transp_1 |
| CAZyme | HRGMv2_0685_2 | HRGMv2_0685_2_19 | 27379 | 30612 | - | GH106 |
| TF | HRGMv2_0685_2 | HRGMv2_0685_2_20 | 30900 | 31766 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_0685_2 | HRGMv2_0685_2_21 | 32041 | 34476 | - | CBM67 | GH78 |
| NULL(UNKNOWN) | HRGMv2_0685_2 | HRGMv2_0685_2_22 | 34553 | 37645 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0685_2 | HRGMv2_0685_2_23 | 37642 | 39663 | - | GH163 |
| NULL(UNKNOWN) | HRGMv2_0685_2 | HRGMv2_0685_2_24 | 39668 | 42709 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0685_2 | HRGMv2_0685_2_25 | 42734 | 43624 | - | BPD_transp_1 |
| TC | HRGMv2_0685_2 | HRGMv2_0685_2_26 | 43638 | 44561 | - | 3.A.1.1.18 |
| NULL(UNKNOWN) | HRGMv2_0685_2 | HRGMv2_0685_2_27 | 44575 | 46332 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0685_2 | HRGMv2_0685_2_28 | 46329 | 48056 | - | GH2 |
| NULL(UNKNOWN) | HRGMv2_0685_2 | HRGMv2_0685_2_29 | 48153 | 51203 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0685_2 | HRGMv2_0685_2_30 | 51219 | 51410 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0685_2 | HRGMv2_0685_2_31 | 51690 | 52973 | - | GH29 |
Gene ID: HRGMv2_0685_2_17
Type: TC
Location: 25472 - 26410 (-)
Type: TC
Location: 25472 - 26410 (-)
Gene ID: HRGMv2_0685_2_18
Type: pfam
Location: 26426 - 27382 (-)
Type: pfam
Location: 26426 - 27382 (-)
Gene ID: HRGMv2_0685_2_19
Type: CAZyme
Location: 27379 - 30612 (-)
Type: CAZyme
Location: 27379 - 30612 (-)
Gene ID: HRGMv2_0685_2_20
Type: TF
Location: 30900 - 31766 (+)
Type: TF
Location: 30900 - 31766 (+)
Gene ID: HRGMv2_0685_2_21
Type: CAZyme
Location: 32041 - 34476 (-)
Type: CAZyme
Location: 32041 - 34476 (-)
Gene ID: HRGMv2_0685_2_22
Type:
Location: 34553 - 37645 (-)
Type:
Location: 34553 - 37645 (-)
Gene ID: HRGMv2_0685_2_23
Type: CAZyme
Location: 37642 - 39663 (-)
Type: CAZyme
Location: 37642 - 39663 (-)
Gene ID: HRGMv2_0685_2_24
Type:
Location: 39668 - 42709 (-)
Type:
Location: 39668 - 42709 (-)
Gene ID: HRGMv2_0685_2_25
Type: pfam
Location: 42734 - 43624 (-)
Type: pfam
Location: 42734 - 43624 (-)
Gene ID: HRGMv2_0685_2_26
Type: TC
Location: 43638 - 44561 (-)
Type: TC
Location: 43638 - 44561 (-)
Gene ID: HRGMv2_0685_2_27
Type:
Location: 44575 - 46332 (-)
Type:
Location: 44575 - 46332 (-)
Gene ID: HRGMv2_0685_2_28
Type: CAZyme
Location: 46329 - 48056 (-)
Type: CAZyme
Location: 46329 - 48056 (-)
Gene ID: HRGMv2_0685_2_29
Type:
Location: 48153 - 51203 (-)
Type:
Location: 48153 - 51203 (-)
Gene ID: HRGMv2_0685_2_30
Type:
Location: 51219 - 51410 (-)
Type:
Location: 51219 - 51410 (-)
Gene ID: HRGMv2_0685_2_31
Type: CAZyme
Location: 51690 - 52973 (-)
Type: CAZyme
Location: 51690 - 52973 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Borkfalkiaceae
Genus
Scatosoma
Species
Scatosoma sp900542935
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.