PROTEIN: HRGMv2_0685_2_27
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Protein File & Metadata
Source:
HRGMv2_0685_2_27.pdb
Genome ID:
Protein ID:
HRGMv2_0685_2_27
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Protein Sequence
MSKIRMKNVL AGALSAAMIF GVAGCAVRES DGEKIDESRT QLYVFNYGGG FGNDWVKALK 60 TSFEALHAED VYEEGKKGVQ VMIDSKKQSF TAADIKSSLY DVFFTESVNY YNLVGASDGA 120 SALLDVTDAL KKPLSDLDAD DTQSVLDKFY DEQLAYYGVD RGDGNLRYYG VPHYAGYWGI 180 IYNVDLFENR GYYFLDDQSD FEESGMLEDR FINTNAPVKQ KRSAGPDGEY NTSDDGLPAT 240 YEEFFALCDY IVTDKVLPLR WTGANYKDYL NTFSYTLAVD FEGKENIMRN YTLSGTANNL 300 GTATDSGFSK DGETTEINAG NGYELARGEG WYHAASFLRN LCLNDNVHNN YHNHNAFNGG 360 YSHMTAQQDF LYGGKDGGKT EEAAMLIDGV WWQMEADQTF KDMVNFYGED CSAQNRKFGY 420 MPLPKATKAK AEETKNSDVK QTLYDAQYAF SFVKSNVEEY KKGLAVEFLR YANTQESLVQ 480 YTEITNTTKA LNYKLSETEK SKLSYFGRSV IEMQEKSEVV YPYAKNSLYL NNASSFRPGM 540 MFKTAVNDKP IYLAETFREN GTSLKDAFNG IYINQKNIWD TLNRG 585
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DNN7-F1-model_v4 | 31 | 585 | 26 | 437 | 0.6654 |
0.816 |
| AF-A0A133CPC5-F1-model_v4 | 37 | 585 | 33 | 423 | 0.6596 |
0.8341 |
| AF-Q9HZ48-F1-model_v4 | 37 | 583 | 22 | 420 | 0.6577 |
0.8136 |
| AF-Q9CCA3-F1-model_v4 | 7 | 585 | 11 | 464 | 0.6559 |
0.7628 |
| AF-K0F002-F1-model_v4 | 39 | 585 | 47 | 439 | 0.6422 |
0.8236 |
| AF-Q8DNU2-F1-model_v4 | 39 | 585 | 39 | 444 | 0.6281 |
0.7881 |
| AF-K0F2E6-F1-model_v4 | 12 | 585 | 5 | 438 | 0.6194 |
0.7298 |
| AF-A0A132Z206-F1-model_v4 | 38 | 506 | 41 | 374 | 0.5978 |
0.8175 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 1 | 585 | 125 | 866 | 0.5089 |
0.6126 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9Q8PNJ5 | GH4 | 1 | 585 | 125 | 866 | 0.5089 |
0.6126 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7eho-assembly2.cif.gz_B | 39 | 584 | 1 | 402 | 0.7077 |
0.8498 |
| 3oo6-assembly2.cif.gz_B | 39 | 585 | 2 | 390 | 0.6954 |
0.8469 |
| 5dvf-assembly2.cif.gz_B | 37 | 582 | 1 | 389 | 0.6929 |
0.8427 |
| 1eu8-assembly1.cif.gz_A | 27 | 585 | 1 | 407 | 0.691 |
0.8264 |
| 3jzj-assembly1.cif.gz_A | 39 | 585 | 3 | 387 | 0.6891 |
0.8454 |
| 5xpj-assembly2.cif.gz_B | 37 | 585 | 1 | 387 | 0.6886 |
0.8398 |
| 6pql-assembly2.cif.gz_B | 39 | 584 | 1 | 384 | 0.6864 |
0.8394 |
| 4zs9-assembly1.cif.gz_A | 39 | 584 | 1 | 377 | 0.6863 |
0.8455 |
| 4g68-assembly3.cif.gz_C | 40 | 582 | 1 | 392 | 0.6839 |
0.83 |
| 4zs9-assembly2.cif.gz_B | 39 | 584 | 1 | 378 | 0.6839 |
0.842 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9KEE7-F1-model_v4 | 18 | 585 | 21 | 445 | 0.6804 |
0.8179 |
| AF-Q92KZ7-F1-model_v4 | 37 | 583 | 20 | 414 | 0.6628 |
0.821 |
| AF-O06875-F1-model_v4 | 37 | 583 | 27 | 421 | 0.658 |
0.822 |
| AF-Q8FVX5-F1-model_v4 | 37 | 583 | 27 | 421 | 0.6579 |
0.8218 |
| AF-Q8YCE2-F1-model_v4 | 37 | 583 | 27 | 421 | 0.6578 |
0.8217 |
| AF-Q7LYW7-F1-model_v4 | 38 | 585 | 42 | 449 | 0.6567 |
0.824 |
| AF-Q98H33-F1-model_v4 | 38 | 583 | 22 | 417 | 0.6564 |
0.8145 |
| AF-O58758-F1-model_v4 | 9 | 585 | 1 | 420 | 0.6555 |
0.773 |
| AF-O50499-F1-model_v4 | 16 | 585 | 19 | 463 | 0.6519 |
0.7717 |
| AF-Q1CBH5-F1-model_v4 | 37 | 585 | 23 | 436 | 0.649 |
0.7951 |