Cluster: HRGMv2_0624_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0624
- CGC Family ID: CGCFAM_00396
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0624_11 | HRGMv2_0624_11_31 | 30664 | 32946 | - | 2.A.6.8.2 |
| pfam | HRGMv2_0624_11 | HRGMv2_0624_11_32 | 32952 | 33557 | - | LolA | LolA_3 |
| NULL(UNKNOWN) | HRGMv2_0624_11 | HRGMv2_0624_11_33 | 33554 | 34546 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0624_11 | HRGMv2_0624_11_34 | 34543 | 35271 | - | GT2 |
Gene ID: HRGMv2_0624_11_31
Type: TC
Location: 30664 - 32946 (-)
Type: TC
Location: 30664 - 32946 (-)
Gene ID: HRGMv2_0624_11_32
Type: pfam
Location: 32952 - 33557 (-)
Type: pfam
Location: 32952 - 33557 (-)
Gene ID: HRGMv2_0624_11_33
Type:
Location: 33554 - 34546 (-)
Type:
Location: 33554 - 34546 (-)
Gene ID: HRGMv2_0624_11_34
Type: CAZyme
Location: 34543 - 35271 (-)
Type: CAZyme
Location: 34543 - 35271 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Burkholderiaceae
Genus
Aphodousia
Species
Aphodousia sp900554675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.