dbCAN Logo

PROTEIN: HRGMv2_0624_11_33

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0624_11_33.pdb
Genome ID:
HRGMv2_0624
Protein ID:
HRGMv2_0624_11_33

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MTQQHWAQNQ   EKTNHWGIVF   LLTIHRYLGR   LPFRIFMGPV   ILFYWLMDKN   VRVHSMDYLQ 60
RAQSYGLFKQ   KPTLMLSLRH   LAFFGETILD   KFLALTDPDD   KATLAIENDQ   MIMDCIARKQ 120
GAIVLTSHMG   CIEKLINHGL   QQKETELVIL   MHTKHARQFN   ALLRDRNQAL   KKIHFMEVSA 180
LSPASACEIE   TYVARGALVF   IAGDRIPIAS   DATCEVSFLG   HKARFPIGGT   ILANLFHCPL 240
FSITCWRTPK   KMPVLSGQTH   HYTVRFGNLS   NGKNVYINRH   QRREDISILV   EGFVRELEAG 300
LAKSPLDWAN   FYAFWPQISE   KSQDDAKDNR 330
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q0P9C0-F1-model_v4 10 320 4 290 0.7642 0.8489
AF-Q5FA75-F1-model_v4 10 321 1 292 0.7358 0.8062
AF-Q9I7B5-F1-model_v4 10 320 2 293 0.7305 0.8031
AF-A0A0H3GLM3-F1-model_v4 10 321 13 303 0.7248 0.808
AF-Q5FAC1-F1-model_v4 10 317 1 281 0.7233 0.8069
AF-Q7AQJ0-F1-model_v4 8 321 20 311 0.7207 0.8179
AF-Q8ZQ24-F1-model_v4 10 321 15 305 0.7199 0.8063
AF-A0A0H3GKT8-F1-model_v4 10 321 15 305 0.7186 0.8053
AF-O25057-F1-model_v4 10 320 28 325 0.7184 0.8125
AF-A0A0H3GR42-F1-model_v4 10 321 15 305 0.7169 0.8034
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-B6EI45-F1-model_v4 GT2 1 322 248 563 0.673 0.8912
AF-A0A2I3CGF3-F1-model_v4 GT2 1 324 254 571 0.6714 0.8882
AF-A0A2L2K3K3-F1-model_v4 GT2 1 323 254 571 0.671 0.8877
AF-A0A249W7L7-F1-model_v4 GT2 1 323 254 571 0.6704 0.8869
AF-A0A7Z2RKG5-F1-model_v4 GT2 1 323 254 571 0.6703 0.8866
AF-A0A7H8DML5-F1-model_v4 GT2 1 323 251 568 0.67 0.8846
AF-A0A7U3LZB2-F1-model_v4 GT2 5 317 160 467 0.6699 0.8519
AF-A0A1W6TAG1-F1-model_v4 GT2 1 323 253 571 0.6696 0.8832
AF-Q6LKR9-F1-model_v4 GT2 1 322 246 562 0.6687 0.8822
AF-M4U4B6-F1-model_v4 GT2 1 319 246 559 0.6681 0.89
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1G8NB73 GT2 1 317 245 550 0.6617 0.9009
A0A5Q2U3X8 GT2 1 320 249 553 0.6584 0.8971
USG62618.1 GT2 1 324 250 557 0.6581 0.8896
F0Q236 GT2 1 320 262 571 0.6565 0.9
A0A5C1B3T1 GT2 1 329 265 586 0.6545 0.8632
A0A9D5TY28 GT2 1 319 251 557 0.6532 0.8875
A0A077AWH0 GT2 1 316 254 552 0.6528 0.9044
A0A4V6PWM0 GT2 1 319 247 553 0.6499 0.8873
A0A7Y6MPJ7 GT2 1 324 276 592 0.6486 0.8719
A0A1E5B670 GT2 1 326 303 622 0.6476 0.8776
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5f34-assembly1.cif.gz_A 51 319 1 245 0.6952 0.8284
5kn7-assembly1.cif.gz_B-2 21 324 5 299 0.6569 0.7398
5knk-assembly1.cif.gz_B-2 21 324 10 304 0.649 0.7364
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0QWG5-F1-model_v4 6 321 10 296 0.7276 0.8205
AF-P0ACV1-F1-model_v4 10 321 15 305 0.7177 0.8042
AF-P0ACV0-F1-model_v4 10 321 15 305 0.7169 0.8035
AF-P9WMB4-F1-model_v4 8 321 20 307 0.7132 0.8162
AF-P0ACV3-F1-model_v4 10 321 15 304 0.7132 0.8004
AF-P0ACV2-F1-model_v4 10 321 15 304 0.7128 0.8002
AF-P9WMB5-F1-model_v4 9 321 22 307 0.7109 0.8185
AF-O06659-F1-model_v4 10 323 20 310 0.7101 0.8057
AF-P59198-F1-model_v4 10 322 22 318 0.7058 0.7955
AF-P24205-F1-model_v4 10 322 22 318 0.7055 0.7952
Download Full SwissProt Results