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Cluster: HRGMv2_0611_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0611_3 HRGMv2_0611_3_146 133160 135616 - GT35
CAZyme HRGMv2_0611_3 HRGMv2_0611_3_147 135833 137293 - GT5
pfam HRGMv2_0611_3 HRGMv2_0611_3_148 137326 138627 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_0611_3 HRGMv2_0611_3_149 138741 140366 - PGM_PMM_I | PGM_PMM_II | PGM_PMM_III | PGM1_C_vert_fung
CAZyme HRGMv2_0611_3 HRGMv2_0611_3_150 140465 142501 - CBM48 | GH13_11
CAZyme HRGMv2_0611_3 HRGMv2_0611_3_151 142507 144684 - CBM48 | GH13_9
sulfatase HRGMv2_0611_3 HRGMv2_0611_3_152 144833 146512 - S1_6
pfam HRGMv2_0611_3 HRGMv2_0611_3_153 146629 147048 + 4HBT | 4HBT_2 | Acyl-ACP_TE_C
TC HRGMv2_0611_3 HRGMv2_0611_3_154 147301 148521 + 2.A.1.2.7
Gene ID: HRGMv2_0611_3_146
Type: CAZyme
Location: 133160 - 135616 (-)
Gene ID: HRGMv2_0611_3_147
Type: CAZyme
Location: 135833 - 137293 (-)
Gene ID: HRGMv2_0611_3_148
Type: pfam
Location: 137326 - 138627 (-)
Gene ID: HRGMv2_0611_3_149
Type: pfam
Location: 138741 - 140366 (-)
Gene ID: HRGMv2_0611_3_150
Type: CAZyme
Location: 140465 - 142501 (-)
Gene ID: HRGMv2_0611_3_151
Type: CAZyme
Location: 142507 - 144684 (-)
Gene ID: HRGMv2_0611_3_152
Type: sulfatase
Location: 144833 - 146512 (-)
Gene ID: HRGMv2_0611_3_153
Type: pfam
Location: 146629 - 147048 (+)
Gene ID: HRGMv2_0611_3_154
Type: TC
Location: 147301 - 148521 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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