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Cluster: HRGMv2_0556_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0556_3 HRGMv2_0556_3_198 224962 225282 - 4.A.3.2.2
CAZyme HRGMv2_0556_3 HRGMv2_0556_3_199 225301 226632 - GH4
CAZyme HRGMv2_0556_3 HRGMv2_0556_3_200 226654 228039 - GH1
TC HRGMv2_0556_3 HRGMv2_0556_3_201 228063 229400 - 4.A.3.2.3
TC HRGMv2_0556_3 HRGMv2_0556_3_202 229435 230772 - 4.A.3.2.3
CAZyme HRGMv2_0556_3 HRGMv2_0556_3_203 230821 231903 - GH170
TC HRGMv2_0556_3 HRGMv2_0556_3_204 231947 232255 - 4.A.3.2.6
Gene ID: HRGMv2_0556_3_198
Type: TC
Location: 224962 - 225282 (-)
Gene ID: HRGMv2_0556_3_199
Type: CAZyme
Location: 225301 - 226632 (-)
Gene ID: HRGMv2_0556_3_200
Type: CAZyme
Location: 226654 - 228039 (-)
Gene ID: HRGMv2_0556_3_201
Type: TC
Location: 228063 - 229400 (-)
Gene ID: HRGMv2_0556_3_202
Type: TC
Location: 229435 - 230772 (-)
Gene ID: HRGMv2_0556_3_203
Type: CAZyme
Location: 230821 - 231903 (-)
Gene ID: HRGMv2_0556_3_204
Type: TC
Location: 231947 - 232255 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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