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Cluster: HRGMv2_0556_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0556_3 HRGMv2_0556_3_84 96563 97879 - 2.A.103.1.2
peptidase HRGMv2_0556_3 HRGMv2_0556_3_85 97872 99869 - X52.001
TC HRGMv2_0556_3 HRGMv2_0556_3_86 100005 101471 - 9.B.174.1.1
pfam HRGMv2_0556_3 HRGMv2_0556_3_87 101643 102578 + Amidase_3
pfam HRGMv2_0556_3 HRGMv2_0556_3_88 102575 103528 - ROK
CAZyme HRGMv2_0556_3 HRGMv2_0556_3_89 103682 105472 + GT2
TC HRGMv2_0556_3 HRGMv2_0556_3_90 105459 106052 - 2.A.51.1.6
TC HRGMv2_0556_3 HRGMv2_0556_3_91 106055 106639 - 2.A.51.1.6
NULL(UNKNOWN) HRGMv2_0556_3 HRGMv2_0556_3_92 106847 107746 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0556_3 HRGMv2_0556_3_93 107989 109608 + 3.A.1.5.18
Gene ID: HRGMv2_0556_3_84
Type: TC
Location: 96563 - 97879 (-)
Gene ID: HRGMv2_0556_3_85
Type: peptidase
Location: 97872 - 99869 (-)
Gene ID: HRGMv2_0556_3_86
Type: TC
Location: 100005 - 101471 (-)
Gene ID: HRGMv2_0556_3_87
Type: pfam
Location: 101643 - 102578 (+)
Gene ID: HRGMv2_0556_3_88
Type: pfam
Location: 102575 - 103528 (-)
Gene ID: HRGMv2_0556_3_89
Type: CAZyme
Location: 103682 - 105472 (+)
Gene ID: HRGMv2_0556_3_90
Type: TC
Location: 105459 - 106052 (-)
Gene ID: HRGMv2_0556_3_91
Type: TC
Location: 106055 - 106639 (-)
Gene ID: HRGMv2_0556_3_92
Type:
Location: 106847 - 107746 (-)
Gene ID: HRGMv2_0556_3_93
Type: TC
Location: 107989 - 109608 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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