Cluster: HRGMv2_0556_CGC29
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0556
- CGC Family ID: CGCFAM_05754
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0556_2 | HRGMv2_0556_2_319 | 378450 | 379790 | + | 2.A.66.1.37 |
| peptidase | HRGMv2_0556_2 | HRGMv2_0556_2_320 | 380146 | 380661 | - | C56.UNW |
| CAZyme | HRGMv2_0556_2 | HRGMv2_0556_2_321 | 380682 | 382175 | - | GT5 |
Gene ID: HRGMv2_0556_2_319
Type: TC
Location: 378450 - 379790 (+)
Type: TC
Location: 378450 - 379790 (+)
Gene ID: HRGMv2_0556_2_320
Type: peptidase
Location: 380146 - 380661 (-)
Type: peptidase
Location: 380146 - 380661 (-)
Gene ID: HRGMv2_0556_2_321
Type: CAZyme
Location: 380682 - 382175 (-)
Type: CAZyme
Location: 380682 - 382175 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Brachyspirae
Order
Brachyspirales
Family
Brachyspiraceae
Genus
Brachyspira
Species
Brachyspira pilosicoli
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.