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Cluster: HRGMv2_0556_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0556_1 HRGMv2_0556_1_971 1098818 1101985 + 2.A.6.3.6
pfam HRGMv2_0556_1 HRGMv2_0556_1_972 1102440 1102928 - AIRC
CAZyme HRGMv2_0556_1 HRGMv2_0556_1_973 1103284 1106436 - GH2
TC HRGMv2_0556_1 HRGMv2_0556_1_974 1106452 1107897 - 2.A.3.7.4
peptidase HRGMv2_0556_1 HRGMv2_0556_1_975 1108182 1109507 + S49.UPB
NULL(UNKNOWN) HRGMv2_0556_1 HRGMv2_0556_1_976 1109551 1109781 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0556_1 HRGMv2_0556_1_977 1110073 1111656 + 3.A.1.5.2
peptidase HRGMv2_0556_1 HRGMv2_0556_1_978 1111720 1115475 - C56.UNW
STP HRGMv2_0556_1 HRGMv2_0556_1_979 1115559 1116983 - HD
TC HRGMv2_0556_1 HRGMv2_0556_1_980 1117120 1118133 - 4.B.1.1.1
TC HRGMv2_0556_1 HRGMv2_0556_1_981 1118152 1118847 - 4.B.1.1.2
Gene ID: HRGMv2_0556_1_971
Type: TC
Location: 1098818 - 1101985 (+)
Gene ID: HRGMv2_0556_1_972
Type: pfam
Location: 1102440 - 1102928 (-)
Gene ID: HRGMv2_0556_1_973
Type: CAZyme
Location: 1103284 - 1106436 (-)
Gene ID: HRGMv2_0556_1_974
Type: TC
Location: 1106452 - 1107897 (-)
Gene ID: HRGMv2_0556_1_975
Type: peptidase
Location: 1108182 - 1109507 (+)
Gene ID: HRGMv2_0556_1_976
Type:
Location: 1109551 - 1109781 (-)
Gene ID: HRGMv2_0556_1_977
Type: TC
Location: 1110073 - 1111656 (+)
Gene ID: HRGMv2_0556_1_978
Type: peptidase
Location: 1111720 - 1115475 (-)
Gene ID: HRGMv2_0556_1_979
Type: STP
Location: 1115559 - 1116983 (-)
Gene ID: HRGMv2_0556_1_980
Type: TC
Location: 1117120 - 1118133 (-)
Gene ID: HRGMv2_0556_1_981
Type: TC
Location: 1118152 - 1118847 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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