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Cluster: HRGMv2_0556_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0556_1 HRGMv2_0556_1_731 848398 850026 - 4.C.1.1.14
TC HRGMv2_0556_1 HRGMv2_0556_1_732 850050 850706 - 1.C.113.1.3
pfam HRGMv2_0556_1 HRGMv2_0556_1_733 850764 851216 - DSPc
pfam HRGMv2_0556_1 HRGMv2_0556_1_734 851232 852080 - Hydrolase_like
TC HRGMv2_0556_1 HRGMv2_0556_1_735 852287 855352 + 4.A.2.1.17
pfam HRGMv2_0556_1 HRGMv2_0556_1_736 855751 856578 + PHP
pfam HRGMv2_0556_1 HRGMv2_0556_1_737 856579 856953 - Rod-binding
TC HRGMv2_0556_1 HRGMv2_0556_1_738 857032 859926 - 1.B.52.2.1
TC HRGMv2_0556_1 HRGMv2_0556_1_739 860057 861664 - 2.A.66.4.1
CAZyme HRGMv2_0556_1 HRGMv2_0556_1_740 861750 862778 - GT26
pfam HRGMv2_0556_1 HRGMv2_0556_1_741 862798 863778 - PFK | DAGK_cat | NAD_kinase
TC HRGMv2_0556_1 HRGMv2_0556_1_742 863844 865268 + 1.A.26.1.1
Gene ID: HRGMv2_0556_1_731
Type: TC
Location: 848398 - 850026 (-)
Gene ID: HRGMv2_0556_1_732
Type: TC
Location: 850050 - 850706 (-)
Gene ID: HRGMv2_0556_1_733
Type: pfam
Location: 850764 - 851216 (-)
Gene ID: HRGMv2_0556_1_734
Type: pfam
Location: 851232 - 852080 (-)
Gene ID: HRGMv2_0556_1_735
Type: TC
Location: 852287 - 855352 (+)
Gene ID: HRGMv2_0556_1_736
Type: pfam
Location: 855751 - 856578 (+)
Gene ID: HRGMv2_0556_1_737
Type: pfam
Location: 856579 - 856953 (-)
Gene ID: HRGMv2_0556_1_738
Type: TC
Location: 857032 - 859926 (-)
Gene ID: HRGMv2_0556_1_739
Type: TC
Location: 860057 - 861664 (-)
Gene ID: HRGMv2_0556_1_740
Type: CAZyme
Location: 861750 - 862778 (-)
Gene ID: HRGMv2_0556_1_741
Type: pfam
Location: 862798 - 863778 (-)
Gene ID: HRGMv2_0556_1_742
Type: TC
Location: 863844 - 865268 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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