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Cluster: HRGMv2_0555_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0555_4 HRGMv2_0555_4_29 28829 30145 - 2.A.103.1.2
peptidase HRGMv2_0555_4 HRGMv2_0555_4_30 30138 32132 - X52.001
STP HRGMv2_0555_4 HRGMv2_0555_4_31 32353 33504 - Fer4
CAZyme HRGMv2_0555_4 HRGMv2_0555_4_32 33515 34519 - GT2
pfam HRGMv2_0555_4 HRGMv2_0555_4_33 34755 35237 + GSHPx | AhpC-TSA
TC HRGMv2_0555_4 HRGMv2_0555_4_34 35307 36023 + 2.A.78.1.1
TC HRGMv2_0555_4 HRGMv2_0555_4_35 36016 36345 + 2.A.78.1.1
Gene ID: HRGMv2_0555_4_29
Type: TC
Location: 28829 - 30145 (-)
Gene ID: HRGMv2_0555_4_30
Type: peptidase
Location: 30138 - 32132 (-)
Gene ID: HRGMv2_0555_4_31
Type: STP
Location: 32353 - 33504 (-)
Gene ID: HRGMv2_0555_4_32
Type: CAZyme
Location: 33515 - 34519 (-)
Gene ID: HRGMv2_0555_4_33
Type: pfam
Location: 34755 - 35237 (+)
Gene ID: HRGMv2_0555_4_34
Type: TC
Location: 35307 - 36023 (+)
Gene ID: HRGMv2_0555_4_35
Type: TC
Location: 36016 - 36345 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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