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Cluster: HRGMv2_0555_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0555_37 HRGMv2_0555_37_15 11211 12233 - 3.A.1.2.3
TC HRGMv2_0555_37 HRGMv2_0555_37_16 12272 13777 - 3.A.1.2.3
TC HRGMv2_0555_37 HRGMv2_0555_37_17 13858 14904 - 3.A.1.2.3
TC HRGMv2_0555_37 HRGMv2_0555_37_18 15036 16076 - 3.A.1.2.3
pfam HRGMv2_0555_37 HRGMv2_0555_37_19 16149 17111 - GFO_IDH_MocA | CoA_binding | GFO_IDH_MocA_C | F420_oxidored | GFO_IDH_MocA_C3
TC HRGMv2_0555_37 HRGMv2_0555_37_20 17345 18442 + 3.A.1.1.22
CAZyme HRGMv2_0555_37 HRGMv2_0555_37_21 18528 19856 - GH4
TC HRGMv2_0555_37 HRGMv2_0555_37_22 19907 21499 - 4.A.1.1.8
Gene ID: HRGMv2_0555_37_15
Type: TC
Location: 11211 - 12233 (-)
Gene ID: HRGMv2_0555_37_16
Type: TC
Location: 12272 - 13777 (-)
Gene ID: HRGMv2_0555_37_17
Type: TC
Location: 13858 - 14904 (-)
Gene ID: HRGMv2_0555_37_18
Type: TC
Location: 15036 - 16076 (-)
Gene ID: HRGMv2_0555_37_19
Type: pfam
Location: 16149 - 17111 (-)
Gene ID: HRGMv2_0555_37_20
Type: TC
Location: 17345 - 18442 (+)
Gene ID: HRGMv2_0555_37_21
Type: CAZyme
Location: 18528 - 19856 (-)
Gene ID: HRGMv2_0555_37_22
Type: TC
Location: 19907 - 21499 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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