dbCAN Logo

Cluster: HRGMv2_0555_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0555_21 HRGMv2_0555_21_2 743 1534 + 2.A.50.2.1
pfam HRGMv2_0555_21 HRGMv2_0555_21_3 1548 2930 + ALGX
NULL(UNKNOWN) HRGMv2_0555_21 HRGMv2_0555_21_4 2927 3142 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0555_21 HRGMv2_0555_21_5 3157 3735 - 2.A.51.1.6
TC HRGMv2_0555_21 HRGMv2_0555_21_6 3732 4310 - 2.A.51.1.6
NULL(UNKNOWN) HRGMv2_0555_21 HRGMv2_0555_21_7 4754 5416 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_0555_21 HRGMv2_0555_21_8 5721 7535 + MCPsignal | dCache_1
CAZyme HRGMv2_0555_21 HRGMv2_0555_21_9 7538 8575 - GT9
Gene ID: HRGMv2_0555_21_2
Type: TC
Location: 743 - 1534 (+)
Gene ID: HRGMv2_0555_21_3
Type: pfam
Location: 1548 - 2930 (+)
Gene ID: HRGMv2_0555_21_4
Type:
Location: 2927 - 3142 (+)
Gene ID: HRGMv2_0555_21_5
Type: TC
Location: 3157 - 3735 (-)
Gene ID: HRGMv2_0555_21_6
Type: TC
Location: 3732 - 4310 (-)
Gene ID: HRGMv2_0555_21_7
Type:
Location: 4754 - 5416 (+)
Gene ID: HRGMv2_0555_21_8
Type: STP
Location: 5721 - 7535 (+)
Gene ID: HRGMv2_0555_21_9
Type: CAZyme
Location: 7538 - 8575 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List