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Cluster: HRGMv2_0553_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0553_28 HRGMv2_0553_28_19 20818 21459 - 3.A.8.1.1
pfam HRGMv2_0553_28 HRGMv2_0553_28_20 21565 22647 - Acyl_transf_3
NULL(UNKNOWN) HRGMv2_0553_28 HRGMv2_0553_28_21 22836 24098 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0553_28 HRGMv2_0553_28_22 24261 25301 - GT4
pfam HRGMv2_0553_28 HRGMv2_0553_28_23 25489 25716 - Hexapep | Hexapep_2 | Hexapep_2
CAZyme HRGMv2_0553_28 HRGMv2_0553_28_24 25984 27051 - GT4
NULL(UNKNOWN) HRGMv2_0553_28 HRGMv2_0553_28_25 27064 27435 - NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0553_28 HRGMv2_0553_28_26 27471 28976 - Zim
TC HRGMv2_0553_28 HRGMv2_0553_28_27 28973 30433 - 2.A.66.2.23
TC HRGMv2_0553_28 HRGMv2_0553_28_28 30462 32792 - 8.A.3.3.4
Gene ID: HRGMv2_0553_28_19
Type: TC
Location: 20818 - 21459 (-)
Gene ID: HRGMv2_0553_28_20
Type: pfam
Location: 21565 - 22647 (-)
Gene ID: HRGMv2_0553_28_21
Type:
Location: 22836 - 24098 (-)
Gene ID: HRGMv2_0553_28_22
Type: CAZyme
Location: 24261 - 25301 (-)
Gene ID: HRGMv2_0553_28_23
Type: pfam
Location: 25489 - 25716 (-)
Gene ID: HRGMv2_0553_28_24
Type: CAZyme
Location: 25984 - 27051 (-)
Gene ID: HRGMv2_0553_28_25
Type:
Location: 27064 - 27435 (-)
Gene ID: HRGMv2_0553_28_26
Type: TF
Location: 27471 - 28976 (-)
Gene ID: HRGMv2_0553_28_27
Type: TC
Location: 28973 - 30433 (-)
Gene ID: HRGMv2_0553_28_28
Type: TC
Location: 30462 - 32792 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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