PROTEIN: HRGMv2_0553_28_21
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Protein File & Metadata
Source:
HRGMv2_0553_28_21.pdb
Genome ID:
Protein ID:
HRGMv2_0553_28_21
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Protein Sequence
MDFKIIKTEH IRSLLAHWPG ITRTQRKLLG DFDPKLLEKA VKRAIRNVPF YKDYAQYIND 60 GIFDITRFPI IRKPDIKGHT EELVSKKIPK CFRVMKRTAG STGIPLDVYY SPRLFIEKDL 120 IVRHLFSLFG KGQRIALLRD HTSTGEIIES TGAKHWLLSP YFLSPQNLDK YLDLLQQLHI 180 NVLHVYPSAI TILARLIKNK YGTCPVKGIR GIFASSESFD KDEKKIVKEV FPEARLIDFY 240 GHNELVCNAS AEDFGDFHFY MNFGYVEFLP TGDTLPNGNI ICEIVATSVL NRTMPLIRYG 300 TQDCVEMDKD GNIVSIYGRT SDFIVTKQGD VVPCLFLTRP SSTLNVINRQ YYQPEPGKLI 360 TRVAVNDKYT EADRISMLED MQRSFKNKMD CDVVIVPSIE RGGRSKQKRL VQDVDIQLYR 420
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DPX2-F1-model_v4 | 1 | 412 | 27 | 436 | 0.6152 |
0.6563 |
| AF-A0A3P7DB79-F1-model_v4 | 1 | 416 | 12 | 421 | 0.5999 |
0.6351 |
| AF-P76085-F1-model_v4 | 22 | 420 | 6 | 427 | 0.5956 |
0.6537 |
| AF-A0A0H3GS56-F1-model_v4 | 22 | 420 | 6 | 427 | 0.5946 |
0.6538 |
| AF-A0A0H3GRA0-F1-model_v4 | 1 | 415 | 3 | 421 | 0.5882 |
0.6215 |
| AF-K0EUZ6-F1-model_v4 | 1 | 414 | 1 | 466 | 0.5839 |
0.6408 |
| AF-A0A077ZIV7-F1-model_v4 | 1 | 415 | 11 | 409 | 0.5829 |
0.6432 |
| AF-A0A175VY11-F1-model_v4 | 96 | 414 | 1 | 352 | 0.5777 |
0.7125 |
| AF-H2KZ58-F1-model_v4 | 8 | 414 | 4 | 461 | 0.5773 |
0.637 |
| AF-X8F207-F1-model_v4 | 1 | 414 | 1 | 416 | 0.5715 |
0.6042 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A387B7M2-F1-model_v4 | GT2 | 5 | 420 | 287 | 732 | 0.6424 |
0.833 |
| AF-A0A6G7YF71-F1-model_v4 | GT2 | 6 | 420 | 284 | 728 | 0.6402 |
0.8275 |
| AF-S4Y6L4-F1-model_v4 | GT2 | 6 | 420 | 287 | 730 | 0.6345 |
0.8277 |
| AF-A9FBI0-F1-model_v4 | GT2 | 6 | 420 | 287 | 730 | 0.6295 |
0.8212 |
| AF-A0A4P7XK67-F1-model_v4 | GT4 | 9 | 416 | 388 | 821 | 0.6291 |
0.86 |
| AF-A0A4P2QA51-F1-model_v4 | GT2 | 6 | 420 | 287 | 732 | 0.6258 |
0.8251 |
| AF-A0A0K1EPJ6-F1-model_v4 | GT2 | 6 | 420 | 345 | 796 | 0.619 |
0.8254 |
| A0A915XJC2 | GT2 | 6 | 420 | 9 | 446 | 0.6167 |
0.8096 |
| AF-W0V5W2-F1-model_v4 | GT4 | 8 | 420 | 382 | 819 | 0.6115 |
0.826 |
| AF-A0A4Y6RAD8-F1-model_v4 | GT4 | 8 | 417 | 376 | 811 | 0.6086 |
0.825 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A387B7M2 | GT2 | 5 | 420 | 287 | 732 | 0.6424 |
0.833 |
| A0A4P7XK67 | GT4 | 9 | 416 | 388 | 821 | 0.6291 |
0.86 |
| A0A0K1EPJ6 | GT2 | 6 | 420 | 345 | 796 | 0.619 |
0.8254 |
| A0A915XJC2 | GT2 | 6 | 420 | 9 | 446 | 0.6167 |
0.8096 |
| A0A1Y0I9L4 | GT4 | 8 | 416 | 413 | 847 | 0.6008 |
0.8277 |
| USX17773.1 | GT4 | 8 | 420 | 398 | 835 | 0.5917 |
0.8036 |
| AZD55811.1 | GT2 | 27 | 390 | 353 | 677 | 0.4495 |
0.7026 |
| A0A5S9IQ86 | GT2 | 7 | 419 | 3 | 462 | 0.4179 |
0.539 |
| A0A9Q8SUF1 | GT32 | 8 | 415 | 899 | 1480 | 0.4038 |
0.6495 |
| A0A8S2AZU5 | GH1 | 25 | 395 | 592 | 1225 | 0.3728 |
0.619 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2y27-assembly1.cif.gz_A | 22 | 415 | 1 | 425 | 0.7428 |
0.8117 |
| 2y4n-assembly1.cif.gz_A | 22 | 415 | 3 | 426 | 0.7368 |
0.8059 |
| 2y4n-assembly1.cif.gz_B | 22 | 414 | 2 | 423 | 0.7356 |
0.8044 |
| 4rvn-assembly1.cif.gz_B | 22 | 414 | 4 | 424 | 0.7291 |
0.7972 |
| 4rvo-assembly1.cif.gz_B | 22 | 414 | 4 | 428 | 0.7283 |
0.8007 |
| 4r1l-assembly3.cif.gz_B | 22 | 414 | 3 | 422 | 0.7276 |
0.7948 |
| 4r1m-assembly1.cif.gz_B | 22 | 414 | 4 | 426 | 0.7257 |
0.7962 |
| 4rvo-assembly2.cif.gz_D | 22 | 415 | 5 | 428 | 0.7221 |
0.7917 |
| 4rvn-assembly2.cif.gz_D | 22 | 418 | 5 | 426 | 0.7201 |
0.7827 |
| 4r1l-assembly3.cif.gz_D | 22 | 418 | 5 | 425 | 0.7191 |
0.7808 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39860-F1-model_v4 | 1 | 419 | 1 | 449 | 0.8225 |
0.8682 |
| AF-O33469-F1-model_v4 | 22 | 415 | 10 | 437 | 0.731 |
0.8103 |
| AF-Q72K16-F1-model_v4 | 22 | 415 | 3 | 445 | 0.7208 |
0.8049 |
| AF-E2JA32-F1-model_v4 | 23 | 412 | 1 | 395 | 0.7123 |
0.7625 |
| AF-P18204-F1-model_v4 | 32 | 415 | 9 | 395 | 0.6367 |
0.6955 |
| AF-A0A345BJN3-F1-model_v4 | 97 | 414 | 1 | 330 | 0.6144 |
0.7425 |
| AF-P76085-F1-model_v4 | 22 | 420 | 6 | 427 | 0.5956 |
0.6537 |
| AF-Q9L9C1-F1-model_v4 | 22 | 420 | 9 | 432 | 0.5942 |
0.6539 |
| AF-C3LAH8-F1-model_v4 | 1 | 413 | 55 | 498 | 0.5681 |
0.6422 |
| AF-Q81T97-F1-model_v4 | 1 | 413 | 55 | 498 | 0.568 |
0.6422 |